On 05/06/15 11:08, Jim Lemon wrote:
Hi James,
You can change the order of levels like this:
levels(viagraData$dose)<-c("placebo","low dose","high dose")
As Richard Heiberger has pointed out, this is wrong.
What *does* work is:
viagraData$dose)<-factor(viagraData$dose,
Sorry, Jim
that doesn't do the right thing.
> tmp <- factor(c("mm", "cm", "dm", "m", "km"))
> levels(tmp)
[1] "cm" "dm" "km" "m" "mm"
> tmp
[1] mm cm dm m km
Levels: cm dm km m mm
> levels(tmp) <- c("mm", "cm", "dm", "m", "km")
> tmp
[1] km mm cm m dm
Levels: mm cm dm m km
> ## back to the beg
Hi James,
You can change the order of levels like this:
levels(viagraData$dose)<-c("placebo","low dose","high dose")
Although I don't know the exact names of the variable and its levels.
Jim
On Fri, Jun 5, 2015 at 7:19 AM, Richard M. Heiberger wrote:
> This example is based on ?glht
>
>> data(
On Jun 4, 2015, at 5:38 PM, John Sorkin wrote:
> I am looking for software that will take data what appears to come from a
> series of low numbers coming from a left-truncated normal distribution and a
> series of higher numbers coming from a normal distribution and produce the
> mean, SD, and
I am looking for software that will take data what appears to come from a
series of low numbers coming from a left-truncated normal distribution and a
series of higher numbers coming from a normal distribution and produce the
mean, SD, and mixing proportion of the two source distributions. I hav
Hi Chris,
I don't have the packages you are using, but tracing this indicates
that the page source contains the relative path of the graphic, in
this case:
/nwisweb/data/img/USGS.12144500.19581112.20140309..0.peak.pres.gif
and you already have the server URL:
nwis.waterdata.usgs.gov
getting the
Hi all,
Does this have something to do with "markdown"? I recently had to
write something using this and found it much more difficult than HTML.
One missed space or character, which is often hard to see, can turn a
whole line to garbage.
Jim
On Thu, Jun 4, 2015 at 9:38 PM, John Kane wrote:
> Hi
No attachment. See
http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example
and http://adv-r.had.co.nz/Reproducibility.html
John Kane
Kingston ON Canada
> -Original Message-
> From: aks...@cosmicad.com
> Sent: Thu, 4 Jun 2015 08:55:42 -0700 (PDT)
> To: r-he
This example is based on ?glht
> data(warpbreaks)
> glht(amod, linfct = mcp(tension = "Dunnett"))
General Linear Hypotheses
Multiple Comparisons of Means: Dunnett Contrasts
Linear Hypotheses:
Estimate
M - L == 0-10.0
H - L == 0-14.7
> levels(warpbreaks$tension)
[1] "L" "M" "
Thanks to all. The suggestion below by Marc Schwarz (the second I tried) showed the
problem. One of the references in one of the files had been pasted in and had a funky
dash in its "111-196" page number. It looked just fine in my emacs window so I hadn't
picked it up. There are 90 .Rd files
Greetings
Below is my code.
library("multcomp")
viaModel1 <- aov(libido ~ dose, data=viagraData)
dunnettModel <- glht(viaModel1 , linfct = mcp(dose = "Dunnett"), base =
"placebo")
The code base="placebo" is ignored. All treatments are compared to the first
treatment in the order, which is "hi
At the bottom you asked for package recs:
Karline Soetaert's (excuse any misspelling) plot3D package should be examined.
I didn't find the fine-grained example that I remember seeing but this is an
example in RGL code:
http://markmail.org/message/wgetbk5h3f7zrfd4
--
David.
On Jun 4, 2015,
I am trying to closely reproduce the 3d yield curve chart that showed up
in the New York Times in March, as seen here
http://www.nytimes.com/interactive/2015/03/19/upshot/3d-yield-curve-economic-growth.html?ref=economy&abt=0002&abg=0
Working with chartSeries3d0 gets me close, but not quite th
On Jun 4, 2015, at 12:56 PM, Therneau, Terry M., Ph.D.
wrote:
>
> I'm checking the survival package and get the following error. How do I find
> the offending line? (There are a LOT of files in the man directory.)
>
> Terry T.
>
> --
>
> * checking PDF version of manual ...
If you use emacs you can use 'M-x find-grep-dired', select the
directory, and search for '‑' (maybe won't work on Windows, I'm not
sure). If you are on Linux (OS X?) you can run the equivalent
find . \( -type f -exec grep -q -e \‑ \{\} \; \) -ls
in a terminal.
Best,
Ista
On Thu, Jun 4, 2015 at
I'm checking the survival package and get the following error. How do I find the offending
line? (There are a LOT of files in the man directory.)
Terry T.
--
* checking PDF version of manual ... WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd proble
On 06/04/2015 10:08 AM, cgenolin wrote:
Hi the list,
I have a variable y that is either NA or some S4 object. I would like to
know in which case I am, but it seems taht is.na does not work with S4
object, I get a warnings:
--- 8<
setClass("myClass",slots=c(x="numeric"))
if(runif(1)
Hi the list,
I have a variable y that is either NA or some S4 object. I would like to
know in which case I am, but it seems taht is.na does not work with S4
object, I get a warnings:
--- 8<
setClass("myClass",slots=c(x="numeric"))
if(runif(1)>0.5){a <- new("myClass")}else{a <- NA}
is
On 04/06/2015 6:42 AM, Yo Gmail wrote:
Hi,
When running help.search(“linear algebra”) or any other valid search keyword
the following error is being returned:
Error in help(db[i, "topic"], package = db[i, "Package"], lib.loc = lib, :
'topic' should be a name, length-one character vector or
I'm working on a script that downloads data from the USGS NWIS server.
dataRetrieval makes it easy to quickly get the data in a neat tabular
format, but I was also interested in getting the tabular text files -
also fairly easy for me using download.file.
However, I'm not skilled enough to work ou
Hi
Pls check the attachment. I am having some error while making a decision
tree in R . Pls help.
--
View this message in context:
http://r.789695.n4.nabble.com/Decision-tree-in-R-using-csv-files-tp4708193.html
Sent from the R help mailing list archive at Nabble.com.
___
On Thu, 4 Jun 2015, T.Riedle wrote:
Error: package 'sandwich' could not be loaded
I have no idea why this happens. I have not done anything before.
Er, the answer is shown.
What can I do to solve this problem?
Install the latest sandwich (hold the mayo), then re-install the package
req
Hi,
When running help.search(“linear algebra”) or any other valid search keyword
the following error is being returned:
Error in help(db[i, "topic"], package = db[i, "Package"], lib.loc = lib, :
'topic' should be a name, length-one character vector or reserved word
I have not installed the
Hello,
I have been using the midasr package for several month. Now I want to start it
again and it does not work anymore. I have installed the newest R version but I
get following message when I am trying to run midasr
install.packages("midasr")
trying URL 'http://cran.rstudio.com/bin/windows/co
Dear Sir,
Thanks for your guidance and sinecerly apologize for late reply from my end.
Regards
Amelia
On Wednesday, 3 June 2015 10:38 PM, Rui Barradas wrote:
Hello,
Try the following.
tmp <- strsplit(as.character(my_dat$instrument), "_")
tmp <- t(as.data.frame(tmp))
tmp <- data.frame(inst
Here are two ways using stack() and reshape() from base R. The "col" variable
indicates which column the bcX value came from. Both are easy to scale up to
multiple columns:
> exnew1 <- data.frame(ex$gIN, stack(ex, 2:3), ex$group)
> names(exnew1) <- c("gIn", "bcX", "col", "group")
> exnew1
gIn
I'm glad this works for you. Myself, I would use paste() to collect the output
to a single variable, then use one instance of cat() to write the whole thing
to file. This saves you retyping ... file="treemap.html", append=TRUE,sep='\n'
... more than once and prevents errors such as the one you e
On Thu, Jun 4, 2015 at 8:47 AM, Wall, Wade A ERDC-RDE-CERL-IL <
wade.a.w...@usace.army.mil> wrote:
> Hi all,
>
> I am trying to pass arguments to a python script using R, but am running
> into a problem with the string being split on the white spaces.
> Investigation on the python end suggests tha
On Jun 4, 2015, at 8:47 AM, Wall, Wade A ERDC-RDE-CERL-IL
wrote:
>
> Hi all,
>
> I am trying to pass arguments to a python script using R, but am running into
> a problem with the string being split on the white spaces. Investigation on
> the python end suggests that it is happening upstream
Yes. This is basic stuff, and it seems unnecessary to run to packages for
it, Knowledge of base R should suffice. It would appear that the OP would
benefit by going through an R tutorial or two.
Slightly more economical and more general -- and trickier -- than explicit
concatenation, which could g
Hi all,
I am trying to pass arguments to a python script using R, but am running into a
problem with the string being split on the white spaces. Investigation on the
python end suggests that it is happening upstream from python, because other
shells such as bash have generated similar errors.
On 04.06.2015 08:06, Pijush Das wrote:
Dear Sir,
I have converted the data into numeric as the function read.excel read the
data file as a character (as it was said by David Meyer, maintainer of the
package e1071) and after that run the function svm. Then another error is
found there. The deta
Hi Jim,
It is an problem in Gavin Simpson's code itself. Bad translation from R to HMTL
it appears
John Kane
Kingston ON Canada
> -Original Message-
> From: drjimle...@gmail.com
> Sent: Thu, 4 Jun 2015 21:22:37 +1000
> To: jacksonmrodrig...@gmail.com
> Subject: Re: [R] Help to solve an
It seems to be some kind of "translation" error from R (or the text editior) to
HMTL. That > does not work.
Try
grecent <- subset(gtemp, Year >= 1995,
select = c(Year, Annual))
John Kane
Kingston ON Canada
> -Original Message-
> From: jacksonmrodrig...@gmail.com
Hi Jackson,
It looks like you have picked up the HTML code for the right angle
bracket. Try replacing this with a right angle bracket:
grecent<-subset(gtemp,subset = Year>=1995,select = c(Year,Annual))
Jim
On Thu, Jun 4, 2015 at 8:20 PM, Jackson Rodrigues
wrote:
> Hi,
>
>
>
> I want to apply t
The dangers of HTML: > should be > a greater than symbol.
grecent <- subset(gtemp, subset = Year >= 1995,select = c(Year, Annual))
I've copied Gavin so he can decide whether to fix it.
Sarah
On Thursday, June 4, 2015, Jackson Rodrigues
wrote:
> Hi,
>
>
>
> I want to apply the codes of Gavin S
Hi,
I want to apply the codes of Gavin Simpson from
http://www.fromthebottomoftheheap.net/2011/06/11/global-warming-since-1995-now-significant/
on my own data to detect trends in a subset. However, when I run:
> grecent <- subset(gtemp, subset = Year >= 1995,select = c(Year,
Annual))
I get err
"low probability of occurring" was just statisticians lingo for "rare" ;-)
ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium
To call
Hi valerio,
This is a great coincidence. I have been working on exactly this
problem in an analysis I have been conducting. When I supply a
character variable to the png function rather than an explicit string,
I get the same error in htmlize. Analyzing the error message, I
realized that it was not
On 04/06/2015 3:59 AM, Thierry Onkelinx wrote:
> Dear Duncan,
>
> I had been thinking about FAQ 7.31. I tried to create a dummy dataset
> with the same structure to replicate the problem with the need of
> sending my dataset. However all of them gave identical() results between
> 32-bit and 64-bit
Dear R members,
I understand the main principles why R-Vegan does not provide p-values for the
biplot scores and/or canonical coefficients (see also post on stackoverflow).
(i) We can obtain linear regression statistics and refit an ordination result
as multiple response linear model (lm, see a
I forgot to use fie= treemap.html :)
On 04 Jun 2015, at 10:53, valerio orfano wrote:
> I have the following code:
>
> setwd("C:/Users/Administrator/Desktop")
> cat("",file="treemap.html", append=TRUE,sep='\n')
> cat("",file="treemap.html", append=TRUE,sep='\n')
> cat("",file="treemap.html", ap
I have the following code:
setwd("C:/Users/Administrator/Desktop")
cat("",file="treemap.html", append=TRUE,sep='\n')
cat("",file="treemap.html", append=TRUE,sep='\n')
cat("",file="treemap.html", append=TRUE,sep='\n')
cat("TreeMap",file="treemap.html", append=TRUE,sep='\n')
cat("","treemap.html", a
Thank you very much Bill,
Your answer to my question is exactly what I was trying to do in my R code.
Best regards.
[[alternative HTML version deleted]]
__
R-help@r-project.org mailing list -- To UNS
Dear Duncan,
I had been thinking about FAQ 7.31. I tried to create a dummy dataset with
the same structure to replicate the problem with the need of sending my
dataset. However all of them gave identical() results between 32-bit and
64-bit. Note that coef()$fRow is a 1266 x 6 data.frame. Is it cor
Belowe My code:
treemap.R
library(portfolio)
library(sendmailR)
setwd("C:/Users/Administrator/Desktop")
data_all <- read.csv("prova_data.txt", sep='\t', stringsAsFactors = FALSE)
distinctstorage <- unique(data_all$Storage)
stor_var <- "Storage001"
filename <-
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