Re: [R] Problem with combining 2 data frame

2019-02-15 Thread Eric Berger
Hi Javad, You have a number of problems with your code, such as: 1. you should set df1 and df2 without factors 2. you define a function f(x,y) but the body of the function never refers to x and y The following code does what I think you are looking for: df1 = data.frame(x1 = letters[1:26],x2 = NA

Re: [R] Saving and reloading function in a package

2019-02-15 Thread Bert Gunter
Do what we all do and learn how to create packages by reading the "Writing R Extensions" manual; or spend time with a tutorial that shows how various packages or IDE's such as the RStudio IDE simplify the process. See also ?package.skeleton and other R functions that can be used to assist you. --

Re: [R] Saving and reloading function in a package

2019-02-15 Thread David Winsemius
Isn't this much more on topic with the package development list? -- David > On Feb 15, 2019, at 6:37 AM, Dimitrios Stasinopoulos > wrote: > > I would like to put a graphic background to a model diagnostic plot. > The background is created with plot()/lines() but it takes time. > My solution

[R] Problem with combining 2 data frame

2019-02-15 Thread javad bayat
Dear R users; I am trying to combine 2 dataframes with different rows, 26 and 6 rows. The first column of both dataframe has something in common, and I want to compare the first column of the df1 with first column of the df2 to see if they are same or not. Then if they were same, the second column

[R] Saving and reloading function in a package

2019-02-15 Thread Dimitrios Stasinopoulos
I would like to put a graphic background to a model diagnostic plot. The background is created with plot()/lines() but it takes time. My solution was to save the plots as functions using splinefun(). Those saved function can be put in a .RData file using load() or .rds using saveRDS(). My qu

Re: [R] Taking the Average of a subset of data

2019-02-15 Thread Bert Gunter
Read the posting guide, please, paying particular attention to how to provide reproducible data, e.g. via ?dput. You are much more likely to get useful help if you do what it recommends and provide data for people to work with. You also should provide code showing us what you tried. You appear not

[R] Taking the Average of a subset of data

2019-02-15 Thread Isaac Barnhart
Hello all, I have another question. I'm working with the following dataset: plotplant leaf_number sen_score plot_laiplant_lai lai_score leaf_num 104 5 1 90 104 1 82 1 104 5 2 90 104 1 167

[R] Help with Cluster Tutorial Error

2019-02-15 Thread Bill Poling
Hi Jeff and David. Yes, updating all my Pkgs has done the trick. I will remember to try that first next time. As always I appreciate your help. Thank you. WHP From: Jeff Newmiller Sent: Friday, February 15, 2019 10:48 AM To: r-help@r-project.org; David L Carlson ; Bill Poling ; r-help (r-

Re: [R] Package updates fail: how to fix the causes [FIXED]

2019-02-15 Thread Rich Shepard
On Fri, 15 Feb 2019, Ista Zahn wrote: Install udunits. Ista, Yep. Installing that package allowed the chain to build. Much appreciated. Best regards, Rich __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/m

Re: [R] Package updates fail: how to fix the causes

2019-02-15 Thread Rich Shepard
On Fri, 15 Feb 2019, Ista Zahn wrote: Install udunits. If you don't know how to do that in slackware go ask on a slackware forum. Ista, Interesting. This must be a new dependency because prior versions of units didn't require it. However, SlackBuilds.org has that package so I'll install it th

Re: [R] Package updates fail: how to fix the causes

2019-02-15 Thread Rich Shepard
On Fri, 15 Feb 2019, Bert Gunter wrote: You *might* do better posting this on r-sig-debian and/or r-sig-fedora, especially as this is not a question about R programming per se, which makes it off topic for this list, but more on topic for those lists. Bert, Since I run only Slackware I'm no

Re: [R] Package updates fail: how to fix the causes

2019-02-15 Thread Ista Zahn
Hi Rich, Install udunits. If you don't know how to do that in slackware go ask on a slackware forum. Best, Ista On Fri, Feb 15, 2019 at 10:58 AM Rich Shepard wrote: > > Running R-3.5.2 on Slackware-14.2, using my script that updates installed > packages found four that failed. My web searches d

Re: [R] Package updates fail: how to fix the causes

2019-02-15 Thread Bert Gunter
You *might* do better posting this on r-sig-debian and/or r-sig-fedora, especially as this is not a question about R programming per se, which makes it off topic for this list, but more on topic for those lists. Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep c

[R] Package updates fail: how to fix the causes

2019-02-15 Thread Rich Shepard
Running R-3.5.2 on Slackware-14.2, using my script that updates installed packages found four that failed. My web searches did not find relevant hits, and only the last build failure is explained by the build failure of a specific dependency. The results displayed are: ERROR: dependency ‘sf’ is n

Re: [R] Help with Cluster Tutorial Error

2019-02-15 Thread Jeff Newmiller
Another possible issue could be some outdated packages... be sure to update all packages. On February 15, 2019 7:05:44 AM PST, David L Carlson wrote: >I'm not getting any error on that line in Windows 10. I did not try >running anything past that line. > >Have you tried restarting R and clearing

Re: [R] Help with Cluster Tutorial Error

2019-02-15 Thread David L Carlson
I'm not getting any error on that line in Windows 10. I did not try running anything past that line. Have you tried restarting R and clearing your environment? David L Carlson Department of Anthropology Texas A&M University College Station, TX 77843-4352

Re: [R] R help

2019-02-15 Thread S Ellison
> I am having an issue with creating a code in which i can hold information such > as the author of a paper, the year of publication, and the title. This doesn't really tell me what the trouble is. But ... > Also would like > to add into this data frame a logical variable which would show some >

Re: [R] POSIXlt class and lapply

2019-02-15 Thread Ista Zahn
As a practical matter, you can't treat POSIXlt as a list. The documentation could be clearer about this. ?DateTimeClasses says "Class ‘"POSIXlt"’ is a named list of vectors", and then later, "Note that the internal list structure is somewhat hidden, as many methods (including ‘length(x)’, ‘print(

[R] Help with Cluster Tutorial Error

2019-02-15 Thread Bill Poling
sessionInfo() #R version 3.5.2 (2018-12-20) #Platform: x86_64-w64-mingw32/x64 (64-bit) #Running under: Windows >= 8 x64 (build 9200) Hello I am working through this tutorial https://www.r-bloggers.com/10-tips-for-choosing-the-optimal-number-of-clusters/ And I run into an error almost immediately

Re: [R] POSIXlt class and lapply

2019-02-15 Thread Newell, Paul
Many thanks Bill Dunlap. You are correct that `lapply` calls `as.list`, which I should have seen if I had looked a little harder. Whether that would have led me to locate `as.list.POSIXlt` is another matter. Best wishes. From: William Dunlap Sent: 14 February 2019 20:03 To: Newell, Paul Cc:

Re: [R] Unexpected errors in sparse Matrix arithmetic with zero-length dimensions

2019-02-15 Thread Martin Maechler
> Aaron Lun > on Sun, 10 Feb 2019 15:22:17 + writes: > Dear list, > The Matrix package exhibits some unexpected behaviour in its arithmetic > methods for the edge case of a sparse matrix with a dimension of zero > length. The example below is the most illustrative,

[R] Simulate High Dimensional Correlated Binary Data

2019-02-15 Thread Eman
Hi all, I have correlated binary data which have around 2000 columns. I need to simulate data like them I have marginal probability vector and correlation matrix. I tried bindata lib but didn’t work with me as l have some negative correlation and I tried also mipfp but give error with using all