Re: [R] Mapping 2D to 3D

2020-09-17 Thread Jeff Newmiller
No, but fortunately you are off in the weeds. Density has an internally-computed "z" coordinate... you should be looking at ?geom_contour. On September 17, 2020 7:17:33 PM PDT, H wrote: >I am trying to understand how to map 2D to 3D using ggplot() and >eventually plot_gg(). I am, however, stuck

Re: [R] Mapping 2D to 3D

2020-09-17 Thread Abby Spurdle
> But there's no reason for the user to do that when using the plotting > function. I should amend the above. There's no reason for the user to do that (compute a third "variable" representing density), if using a high level plotting function, that's designed to compute the density for you. It i

Re: [R] Mapping 2D to 3D

2020-09-17 Thread Abby Spurdle
I'm not familiar with the gg graphics system. However, I am familiar with density estimation, and density visualization. There is *no* third variable, as such. But rather, density estimates, which in this context, would usually be a matrix. (And are computed inside the plotting or density estimati

[R] Mapping 2D to 3D

2020-09-17 Thread H
I am trying to understand how to map 2D to 3D using ggplot() and eventually plot_gg(). I am, however, stuck on understanding how to express the third variable to be mapped. This example: ggdiamonds = ggplot(diamonds, aes(x, depth)) + stat_density_2d(aes(fill = stat(nlevel)), geom = "polygon", n

Re: [R] multiple time series plots

2020-09-17 Thread Jim Lemon
Hi Peri, In that case, try this: ylim<-range(c(df$Nation,df$East,df$Center),na.rm=TRUE) plot(df$year, df$Nation, type="o", col="blue", lty=1, ylab="change",ylim=ylim) Jim On Fri, Sep 18, 2020 at 11:10 AM peri He wrote: > > Hi Jim, > > Thank you for your reply. > > Sorry I am messaging you inste

Re: [R] how to overlay two histograms

2020-09-17 Thread Ana Marija
HI Jim, fantastic solution! Thank you so much!!! Ana On Thu, Sep 17, 2020 at 6:01 PM Jim Lemon wrote: > > Hi Ana, > Sorry it's not in ggplot, but it may help: > > d<-read.table(text="CHR counts name > 1 193554 old > 2 220816 old > 3 174350 old > 4 163112 old > 5 168125 old > 6

Re: [R] multiple time series plots

2020-09-17 Thread Jim Lemon
Hi Peri, Without the data this is only a guess, but are the values of East and center within the limits of the plot generated by Nation? Jim On Fri, Sep 18, 2020 at 10:12 AM peri He wrote: > > Dear Friends, > > I am trying to add two time series curves into one plot. I don't get any > error but

[R] multiple time series plots

2020-09-17 Thread peri He
Dear Friends, I am trying to add two time series curves into one plot. I don't get any error but the lines are not added to my plot. I am trying the following code; 1) df <- as.data.frame (read_excel("C:/Users/NO2.xlsx", "trend)) 2) plot(df$year, df$Nation, type="o", col="blue", lty=1, ylab="ch

Re: [R] how to overlay two histograms

2020-09-17 Thread Rasmus Liland
On 2020-09-17 17:01 -0500, Ana Marija wrote: > Hello, > > I am trying to overlay two histograms with this: > > p <- ggplot(d, aes(CHR, counts, fill = name)) + geom_bar(position = "dodge") > p > > but I am getting this error: > Error: stat_count() can only have an x or y aesthetic. > Run `rlang::

Re: [R] how to overlay two histograms

2020-09-17 Thread Jim Lemon
Hi Ana, Sorry it's not in ggplot, but it may help: d<-read.table(text="CHR counts name 1 193554 old 2 220816 old 3 174350 old 4 163112 old 5 168125 old 6 182366 old 7 143023 old 8 147410 old 9 122112 old 10 138394 old 11 130069 old 12 124850 old 13 104119 old 14

[R] how to overlay two histograms

2020-09-17 Thread Ana Marija
Hello, I am trying to overlay two histograms with this: p <- ggplot(d, aes(CHR, counts, fill = name)) + geom_bar(position = "dodge") p but I am getting this error: Error: stat_count() can only have an x or y aesthetic. Run `rlang::last_error()` to see where the error occurred. my data is this:

Re: [R] linearHypothesis

2020-09-17 Thread John Fox
Dear Johan, It's generally a good idea to keep the conversation on r-help to allow list members to follow it, and so I'm cc'ing this response to the list. I hope that it's clear that car::linearHypothesis() computes the test as a Wald test of a linear hypothesis and not as a likelihood-ratio

Re: [R] Seasonal adjustment with seas - Error: X-13 has returned a non-zero exist status

2020-09-17 Thread Jeff Newmiller
I don't know definitively, but if I were in your shoes I would put my personal package library on a local drive. UNC paths are not supported by all of the Windows file-related system calls. On September 17, 2020 6:59:33 AM PDT, "Weber Sylvain (HES)" wrote: >Dear all, > >I am using function "se

Re: [R] Seasonal adjustment with seas - Error: X-13 has returned a non-zero exist status

2020-09-17 Thread Jeff Newmiller
I don't know definitively, but if I were in your shoes I would put my personal package library on a local drive. UNC paths are not supported by all of the Windows file-related system calls. On September 17, 2020 6:59:33 AM PDT, "Weber Sylvain (HES)" wrote: >Dear all, > >I am using function "se

Re: [R] Seasonal adjustment with seas - Error: X-13 has returned a non-zero exist status

2020-09-17 Thread Bill Dunlap
The problem might to due to using an UNC path (//machine//blah/...) instead of the traditional DOS path ("H:/blah/..."). E.g., if my working directory has a UNC path, cmd.exe will not work as expected: > getwd() [1] "server/dept/devel/bill-sandbox" > system("C:\\WINDOWS\\SYSTEM32\\cmd.exe /c e

Re: [R] Seasonal adjustment with seas - Error: X-13 has returned a non-zero exist status

2020-09-17 Thread Bert Gunter
Consider contacting the package maintainer, found by: maintainer("seasonal") for such a package specific question. Cheers, Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic s

[R] Seasonal adjustment with seas - Error: X-13 has returned a non-zero exist status

2020-09-17 Thread Weber Sylvain (HES)
Dear all, I am using function "seas" from package "seasonal" for seasonal adjustment of time series. I am using the latest version of R (4.0.2, 64-bit). The following lines provide a small working example: ## EXAMPLE ## library(seasonal) m <- seas(AirPassengers) m On my private laptop, everythin

Re: [R] Unnesting JSON using R

2020-09-17 Thread William Michels via R-help
Hi Fred, I believe the preferred package is jsonlite: https://cran.r-project.org/package=jsonlite https://jeroen.cran.dev/jsonlite/index.html HTH, Bill. W. Michels, Ph.D. On Tue, Sep 15, 2020 at 1:48 PM Fred Kwebiha wrote: > > Source=https://jsonformatter.org/e038ec > > The above is nested jso

Re: [R] linearHypothesis

2020-09-17 Thread John Fox
Dear Johan, On 2020-09-17 9:07 a.m., Johan Lassen wrote: Dear R-users, I am using the R-function "linearHypothesis" to test if the sum of all parameters, but the intercept, in a multiple linear regression is different from zero. I wonder if it is statistically valid to use the linearHypothesis

[R] linearHypothesis

2020-09-17 Thread Johan Lassen
Dear R-users, I am using the R-function "linearHypothesis" to test if the sum of all parameters, but the intercept, in a multiple linear regression is different from zero. I wonder if it is statistically valid to use the linearHypothesis-function for this? Below is a reproducible example in R. A

Re: [R] How to reduce the sparseness in a TDM to make a cluster plot readable?

2020-09-17 Thread Abby Spurdle
I'm not familiar with these subjects. And hopefully, someone who is, will offer some better suggestions. But to get things started, maybe... (1) What packages are you using (re: tdm)? (2) Where does the problem happen, in dist, hclust, the plot method for hclust, or in the package(s) you are using