[R] Multiple Data Import Excel

2022-01-03 Thread Bradley Heins via R-help
Hello, I have 2100 Excel files (.xlsx) that I need to read and combine into 1 file. I am perplexed because the first 6 lines are header information and the 8th line are the columns that are needed with the data in columns. I need to save the first last (IceTag ID) because that number becomes the

Re: [R] Connect R with Ensemble Rest API to fetch variations

2022-01-03 Thread William Michels via R-help
Hello Anas, You can find courses and/or training materials on the Ensembl/EBI websites, including R code: https://www.ebi.ac.uk/training/online/courses/ensembl-rest-api/ http://training.ensembl.org/ You can also click on individual 'Ensembl REST API Endpoints', and find sample R code there:

Re: [R] Connect R with Ensemble Rest API to fetch variations

2022-01-03 Thread Bert Gunter
Your query is completely off topic here. I suggest you try posting at: https://www.bioconductor.org/help/ instead. I also suggest that you read and follow their posting guide before doing so. Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things

[R] Connect R with Ensemble Rest API to fetch variations

2022-01-03 Thread Anas Jamshed
I have a list of 422 genes in excel file .I want to know if its possible to get snps details of these gene by using Ensemble Rest API or biomart? [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and

Re: [R] Speed up studentized confidence intervals ?

2022-01-03 Thread varin sacha via R-help
Dear John, Dear Rui, I really thank you a lot for your R code. Best, SV Le jeudi 30 décembre 2021, 05:25:11 UTC+1, Fox, John a écrit : Dear varin sacha, You didn't correctly adapt the code to the median. The outer call to mean() in the last line shouldn't be replaced with median()

Re: [R] mixture univariate distributions fit

2022-01-03 Thread PIKAL Petr
Hallo Bert The discussion starts to be more off topic here, as you already pointed. There probably is not any package (function) in R designed for easy overlapping peak (distribution) fitting. With original data one could use mixtools, with density or cummulative density values Ivan's