Re: [R] dotplots with error bars

2012-02-15 Thread Colin Wahl
the labels are incorrect. The labels cycle through CA-I, CAIII, CA-II, in that order. The plot file is attached. Colin On Mon, Feb 13, 2012 at 1:31 AM, Jim Lemon wrote: > On 02/13/2012 09:51 AM, Colin Wahl wrote: >> >> Does anyone have any recommendations for producing dotplots wit

[R] dotplots with error bars

2012-02-12 Thread Colin Wahl
Does anyone have any recommendations for producing dotplots with error bars? Are there packages available for this? I searched far and wide and cannot find a suitable option. I am trying to produce publication-quality figures for my thesis results. Dotplots (Cleveland dotplots) are a much better f

[R] Problem with range()

2012-02-01 Thread Colin Wahl
a why R cant do vector functions for these data? Solution? Thanks, Colin Wahl M.S. Biology candidate Western Washington University fit<-lm(sandcomb ~ CCEC25) z<-predict(fit, data.frame(CCEC25=range(CCEC25))) lines(range(CCEC25), z, lty=2, lwd=0.75, col="grey51") > is

[R] PCA: prcomp rotations

2011-09-28 Thread Colin Wahl
on samples(rows))? Thank you, Colin Wahl Graduate student, Western Washington University code & background: I am looking at the ordination of abiotic stream variables between different sampling locations. abiot.pca=prcomp(all24[, c(10, 13:18)], retx=TRUE, center=TRUE, scale= TRUE

[R] Cleveland Dot plots: tick labels and error bars

2011-07-20 Thread Colin Wahl
ut$N.upper, as.numeric(y), nut$N.lower, as.numeric(y), lty=1 , col=1) }) I have no experience with panel functions and would very much appreciate advice. Thank you, Colin Wahl Graduate Student Dept. of Biology Western Washington University [[alternative HTML version deleted]]

[R] Cleveland dot plots

2011-06-07 Thread Colin Wahl
I would rather use cleveland dot plots than bar charts to display my study results. I have not been able to find (or figure out) an R package that is capable of producing the publication quality dot charts Im looking for. I have either not been able to get error bars (lattice), cannot order the dat