[R] Suggestions for workaround for R Markdown problem with data() ?

R version: 3.1.2 (2014-10-31) RStudio version: 0.98.1091 MacOS X Yosemite v. 10.10.1 When I run the following in the console, all is well: data(IlluminaHumanMethylation450kanno.ilmn12.hg19) Yet, when I compile in my .Rmd file, in RStudio (knit to PDF), I get the following error: Error in

Re: [R] Suggestions for workaround for R Markdown problem with data() ?

(IlluminaHumanMethylation450kanno.ilmn12.hg19) data(IlluminaHumanMethylation450kanno.ilmn12.hg19) ``` Regards, Yihui -- Yihui Xie xieyi...@gmail.com Web: http://yihui.name On Mon, Jan 12, 2015 at 12:06 AM, Molly Elliott ellio...@onid.oregonstate.edu wrote: R version: 3.1.2 (2014-10-31) RStudio version

[R] phyper returning zero

Thanks Elliott This message has been scanned for malware by Websense. www.websense.com [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

Re: [R] phyper returning zero

Thanks Michael I assumed as much but we know what that did. Thanks again. Elliott -Original Message- From: R. Michael Weylandt [mailto:michael.weyla...@gmail.com] Sent: 15 March 2013 09:29 To: elliott harrison Cc: r-help@r-project.org Subject: Re: [R] phyper returning zero On Fri, Mar

[R] multiple log-rank test for adjusted P value

Hello R users: I wonder if there are functions for multiple log-rank tests with adjusted P-values. I found survdiff( ) only give pooled tests but without pairwise ones. Thanks a lot ! best wishes zhang zihong -- View this message in context:

[R] make check from R2.12.0.exe installation

that this is all available to me but the tests directory I have does not contain the scripts that the tar file does. How do I check the installation when R is installed in this manner? Many thanks Elliott [[alternative HTML version deleted

[R] make check from R2.12.0.exe installation

available to me but the tests directory I have does not contain the scripts that the tar file does. How do I check the installation when R is installed in this manner? Many thanks Mr Elliott Harrison Senior Research Associate Epistem Ltd 48 Grafton Street Manchester, M13 9XX. UK Office Tel:  +44

[R] maptools-export owin as shapefile, error message

in write.polylistShape(pls, df, file = fn, factor2char = factor2char, : different number of rows in polylist and data frame thanks for any help, Tom Elliott, Central Washington University [[alternative HTML version deleted]] __ R-help@r