Re: [R] shading in overlap between two ranges

2011-06-06 Thread Graves, Gregory
This worked perfectly. An example graphic is located here: ftp://ftp.sfwmd.gov/pub/ggraves/ribbon.bmp -Original Message- From: Dennis Murphy [mailto:djmu...@gmail.com] Sent: Thursday, June 02, 2011 12:11 PM To: Graves, Gregory Cc: r-help@r-project.org; Kemp, Susan K SAJ; patrick_pi

[R] shading in overlap between two ranges

2011-06-02 Thread Graves, Gregory
I have 2 datafiles 'target' and 'observed' as shown below (I will gladly email these 2 small files to whomever). X25. And X75. Indicate the value of 25th and 75th-percentile of the target ('what should be') and the observed ('what is'). The i.value is simply the month. target X

[R] how to eliminate first row in datafile created in do loop

2011-05-24 Thread Graves, Gregory
I am trying to create a routine that would take a time series and generate monthly 25%tile and 75%tile limits based on 12 calendar months. I have succeeded to create a do loop to do this, but can't figure out how to initiate the receiving datafile (in this case limit.list) without sticking an

Re: [R] how to eliminate first row in datafile created in do loop

2011-05-24 Thread Graves, Gregory
Message- From: Ian Gow [mailto:iand...@gmail.com] Sent: Tuesday, May 24, 2011 8:58 AM To: Graves, Gregory; Nungesser, Martha; r-help@r-project.org Cc: Kemp, Susan K SAJ; patrick_pi...@fws.gov Subject: Re: [R] how to eliminate first row in datafile created in do loop Gregory: Would setting

Re: [R] tapply output as a dataframe

2011-02-03 Thread Graves, Gregory
On Mon, Apr 13, 2009 at 12:41 PM, Dan Dube ddube-at-advisen.com wrote: i use tapply and by often, but i always end up banging my head against the wall with the output. The proposed solution of Dan's problem posted on R-help was: do.call(rbind,a) When I use this 'solution' I get 'ERROR:

Re: [R] tapply output as a dataframe

2011-02-03 Thread Graves, Gregory
District Phones:  DESK: 561 / 682 - 2429       CELL:  561 / 719 - 8157 -Original Message- From: David Winsemius [mailto:dwinsem...@comcast.net] Sent: Thursday, February 03, 2011 12:50 PM To: Graves, Gregory Cc: r-help@r-project.org; Goodman, Patricia; Gorman, Patricia

Re: [R] tapply output as a dataframe

2011-02-03 Thread Graves, Gregory
-Original Message- From: Phil Spector [mailto:spec...@stat.berkeley.edu] Sent: Thursday, February 03, 2011 12:41 PM To: Graves, Gregory Cc: r-help@r-project.org; Goodman, Patricia; Gorman, Patricia Subject: Re: [R] tapply output as a dataframe Try as.data.frame(as.table

Re: [R] reference text variables as column name to plot [SOLVED]

2010-12-01 Thread Graves, Gregory
Sciences Department South Florida Water Management District Phones:  DESK: 561 / 682 - 2429       CELL:  561 / 719 - 8157 -Original Message- From: David Winsemius [mailto:dwinsem...@comcast.net] Sent: Tuesday, November 30, 2010 11:50 AM To: Graves, Gregory Cc: r-help@r-project.org

[R] reference text variables as column name to plot

2010-11-30 Thread Graves, Gregory
Having given myself carpal tunnel looking for answer to this ... I have a dataset each column of which has 12 rows in it. I created a variable 'z' as follows: z=1:24 Since I have a large number of these plots to make, and they are a bit complex, I want to want to reference the

[R] stacking consecutive columns

2010-11-17 Thread Graves, Gregory
I have a file, each column of which is a separate year, and each row of each column is mean precipitation for that month. Looks like this (except it goes back to 1964). monthX2000 X2001 X2002 X2003 X2004 X2005 X2006 X2007 X2008 X2009 11.600 1.010 4.320 2.110

Re: [R] stacking consecutive columns

2010-11-17 Thread Graves, Gregory
Management District Phones:  DESK: 561 / 682 - 2429       CELL:  561 / 719 - 8157 -Original Message- From: Patrick Hausmann [mailto:patrick.hausm...@uni-bremen.de] Sent: Wednesday, November 17, 2010 9:49 AM To: r-help@r-project.org; Graves, Gregory Subject: Re: [R] stacking

Re: [R] stacking consecutive columns

2010-11-17 Thread Graves, Gregory
-Original Message- From: Patrick Hausmann [mailto:patrick.hausm...@uni-bremen.de] Sent: Wednesday, November 17, 2010 9:49 AM To: r-help@r-project.org; Graves, Gregory Subject: Re: [R] stacking consecutive columns Hi Gregory, is this what you want? Ok, not the most elegant way

Re: [R] failure to access packages

2010-09-22 Thread Graves, Gregory
I am helping a fellow worker get R up and running, and he has run into a peculiar problem I've not encountered in previous install situations. From the Rconsole menu choice, he can set CRAN mirror to USA CA2, but when he selects load packages a very truncated list of packages appears (many

Re: [R] failure to access packages

2010-09-22 Thread Graves, Gregory
) Restoration Sciences Department South Florida Water Management District Phones:  DESK: 561 / 682 - 2429       CELL:  561 / 719 - 8157 -Original Message- From: Graves, Gregory Sent: Wednesday, September 22, 2010 11:45 AM To: 'r-help@r-project.org' Cc: King, Christopher

[R] interpretation of stress in NMDS

2010-07-22 Thread Graves, Gregory
Among those users of Primer, stress values greater than 0.3 are interpreted as questionable. Using both isoMDS and metaMDS (vegan package), the stress values returned are much higher using my own data and using examples provided in R Help. For example Rstress = 8.3, and the stressplot r2 = 0.99

[R] Exporting NMDS distance matris to csv

2010-07-20 Thread Graves, Gregory
If you submit these lines, you end up with variable vare.dis. I want to export vare.dis to csv. Stuck I am. library(vegan,logical.return = TRUE) #return=true verifies package is available library(MASS,logical.return=TRUE) #return=true verifies package is available data(varespec)

[R] nls model fitting errors

2010-06-10 Thread Graves, Gregory
What am I failing to understand here? The script below works fine if the dataset being used is DNase1 - DNase[ DNase$Run == 1, ] per the example given in help(nlrob). Obviously, I am trying to understand how to use nls and nlrob to fit curves to data using R. #package=DAAG

Re: [R] shading between two smoothed curves

2009-08-14 Thread Graves, Gregory
CELL:  561 / 719 - 8157 From: Debabrata Midya [mailto:debabrata.mi...@commerce.nsw.gov.au] Sent: Thursday, August 13, 2009 6:36 PM To: Graves, Gregory Cc: r-help@r-project.org Subject: Re: [R] shading between two smoothed curves Hi Gregory,   I can plot out two nice

Re: [R] shading between two smoothed curves

2009-08-14 Thread Graves, Gregory
CELL:  561 / 719 - 8157 -Original Message- From: Jim Lemon [mailto:j...@bitwrit.com.au] Sent: Friday, August 14, 2009 8:47 AM To: Graves, Gregory Cc: r-help@r-project.org Subject: Re: [R] shading between two smoothed curves Graves, Gregory wrote: I will attempt

Re: [R] shading between two smoothed curves

2009-08-14 Thread Graves, Gregory
CELL:  561 / 719 - 8157 -Original Message- From: Graves, Gregory Sent: Friday, August 14, 2009 1:38 PM To: r-help@r-project.org Subject: RE: [R] shading between two smoothed curves Here is the solution for shading under a curve attach(cars) #example dataset

[R] shading between two smoothed curves

2009-08-13 Thread Graves, Gregory
I have a set of 52 weekly values, one is the desired high lake stage for a week, and the other is the desired low lake stage for each week. It looks like this: week High Low 1 16 14.5 2 16 14.5 3 15.95 14.45 4 15.84 14.34 5 15.73 14.23 6 15.61 14.11 7 15.5 14 8 15.38

[R] how to use a list to create a plot

2009-07-21 Thread Graves, Gregory
I issued the following command to obtain the std dev for each month. psd-numSummary(Sal, groups=month, statistics=c(sd)) which resulted in psd sd n NA 1 6.930340 9367 2319 2 7.847003

[R] increase number of ticks on x axis of dates

2009-06-08 Thread Graves, Gregory
My x axis is a series of daily dates (e.g., 01/01/2000, 01/02/2000, etc.) from 2000 to end of 2008. The default only gives me 4 ticks. I want more. Why doesn't this work? sdate-as.POSIXct(strptime(date,format=%m/%d/%Y))

Re: [R] replacing default axis labels on a plot - SOLUTION

2009-05-15 Thread Graves, Gregory
The original problem posed was: On 14/05/2009 7:31 AM, Graves, Gregory wrote: I have 3 columns: flow, month, and monthname, where month is 1-12, and monthname is name of month. I can't get the plot to replace the 1-12 with monthname using ticks.lab. What am I doing wrong? plot(flow

[R] replacing default axis labels on a plot

2009-05-14 Thread Graves, Gregory
I have 3 columns: flow, month, and monthname, where month is 1-12, and monthname is name of month. I can't get the plot to replace the 1-12 with monthname using ticks.lab. What am I doing wrong? plot(flow~factor(month),xlab=Month,ylab=Total Flow per Month, ylim=c(0,55000), ticks.lab=monthname)

Re: [R] replacing default axis labels on a plot

2009-05-14 Thread Graves, Gregory
Division South Florida Water Management District Phones: DESK: 561 / 682 - 2429 CELL: 561 / 719 - 8157 -Original Message- From: Duncan Murdoch [mailto:murd...@stats.uwo.ca] Sent: Thursday, May 14, 2009 8:12 AM To: Graves, Gregory Cc: r-help@r-project.org Subject

[R] creating a matrix as input to lowess

2009-03-27 Thread Graves, Gregory
I have a very large file with many rows and columns. I want to create a plot with lowess. If I try the following it works fine: data(PrecipGL) plot(PrecipGL) lines(lowess(time(PrecipGL),PrecipGL),lwd=3, col=2) In my file, 2 columns are nox and sdate, and are both typeof() = double.

[R] sdate-as.POSIXct(strptime(date,format=%m/%d/%Y %H:%M))

2009-01-01 Thread Graves, Gregory
Newbie here~ I've spent a ton of time on this, but have to admit I am stuck. I've tried various combinations of strptime and the package CHRON, but still can't get there. My simple task is that I want to plot salinity (S1 or S2) on y-axis and time on x-axis, but I want to use a