On Aug 12, 2010, at 2:24 PM, Marc Schwartz wrote:
On Aug 12, 2010, at 2:11 PM, Toby Gass wrote:
Dear helpeRs,
I have a dataframe (14947 x 27) containing measurements collected
every 5 seconds at several different sampling locations. If one
measurement at a given location is less than
On Aug 12, 2010, at 3:06 PM, Toby Gass wrote:
Thank you all for the quick responses. So far as I've checked,
Marc's solution works perfectly and is quite speedy. I'm still
trying to figure out what it is doing. :)
Henrique's solution seems to need some columns somewhere. David's
...)
2. I don't know if the fortunes package is the right place, but this exchange
needs to be captured...
Regards,
Marc Schwartz
P.S. Pardon me while I go visit with the Emacs Psychotherapist (version 23 of
course...)
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of the dimensions that you have
specified. You can alter that default behavior by using:
\usepackage[nogin]{Sweave}
in your document preamble. The figures will then be set to the sizes that you
define in the figure chunk header.
See ?RweaveLatex for more information.
HTH,
Marc Schwartz
can disable the behavior by putting:
(ess-toggle-underscore nil)
in your .emacs file.
Also, as you may be aware, there is a dedicated ESS help list at:
https://stat.ethz.ch/mailman/listinfo/ess-help
HTH,
Marc Schwartz
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be bolded using a \pkg
directive (eg. \pkg{YourPackageName}), which would bold the package name within
the braces.
If you are doing this outside of those environments, you can duplicate the
effect by using \textbf{YourPackageName}, which would bold the text within the
braces only.
HTH,
Marc
at Gabor's 'gsubfn' CRAN package to see if he is
utilities there that may be relevant.
HTH,
Marc Schwartz
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details, which can impact whether or not you can
sell a closed source GUI that runs on top of R.
At the end of the day, you have a fiduciary responsibility to your company to
seek formal legal advice. That is part of the cost of doing business and making
informed decisions.
HTH,
Marc Schwartz
Thanks,
Alfredo
The easiest way is to use a back reference to return the part of the vector
that you want:
gsub(^.*_(.*)\\.csv$, \\1, piante_venere.csv)
[1] venere
In this case, the \\1 returns the part of the regex defined within the parens.
HTH,
Marc Schwartz
Strongly Disagree Somewhat Disagree NeutralSomewhat Agree
0 1 2 7
Strongly Agree
12
Now do the barplot():
MyTab - table(MyData)
barplot(MyTab, names.arg = MyTab)
HTH,
Marc Schwartz
mollit anim id est laborum.
HTH,
Marc Schwartz
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, it was perhaps 20+ years ago,
but as a result, I am quite anal retentive about having backups, which I have
done for some time on my systems, hourly.
HTH,
Marc Schwartz
On Jul 28, 2010, at 5:55 AM, Jarrod Hadfield wrote:
Hi Martin,
I think this is the most likely reason given that the name
On Jul 28, 2010, at 3:18 PM, Bos, Roger wrote:
Ubuntu also uses ~ as a backup file syntax, but Ubuntu has a trash can
where deleted files are located, so it would be easy to restore them. I
would be surprised if Fedora didn't also have a trash can.
snip
Roger,
It does, but that is only if
)
...
Signif. codes: 0 `***' 0.001 `**' 0.01 `*' 0.05 `.' 0.1 ` ' 1
...
HTH,
Marc Schwartz
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.
Regards,
Marc Schwartz
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
a two level response.
BTW, if you are going to use a function (eg. rmvnorm()) from an external
package, be sure to include the relevant library() call in your example code so
folks don't need to guess which CRAN package(s) may be required to run it.
HTH,
Marc Schwartz
, col.names, sep, dec or qmethod are ignored, with a warning.
If you want to use 'append', you will need to use write.table() and adjust the
other arguments as you require.
HTH,
Marc Schwartz
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the two
bounding sets of characters.
HTH,
Marc Schwartz
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)
The result of which will be a single data frame containing all of the rows from
each of the data frames in the list.
HTH,
Marc Schwartz
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:36 AM, Marc Schwartz marc_schwa...@me.com wrote:
On Jul 15, 2010, at 9:41 AM, Cliff Clive wrote:
I'm running R 2.11.0 on a 32-bit Windows XP machine. Whenever I try to
write
a csv file with 'append' set to TRUE, I get this message: attempt to set
'append' ignored.
Obviously
, Marc Schwartz marc_schwa...@me.com wrote:
On Jul 15, 2010, at 2:18 PM, Ted Byers wrote:
The data.frame is constructed by one of the following functions:
funweek - function(df)
if (length(df$elapsed_time) 5) {
rv = fitdist(df$elapsed_time,exp)
rv$year = df$sale_year[1]
rv$sample
On Jul 15, 2010, at 11:27 AM, AndrewPage wrote:
Actually I have one more question that's somewhat related-- I'm starting out
by importing a .txt file that isn't divided into vectors and is at times
inconsistent with regards to spacing, indents, etc., so I can't rely on
those. It looks
Ted,
Based upon your code below, you might be better off using two lapply()
constructs to create the x and y results separately, taking advantage of
lapply()'s built-in ability to create lists 'on the fly', while returning a
NULL when the function will not be applied to the data based upon
results as
compared to the online calculator.
HTH,
Marc Schwartz
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and provide commented, minimal
the DSN connection information
with your Oracle Admin.
See:
vignette(RODBC)
for more information.
Are you by chance on a 64 bit Windows platform, running 32 bit R? If so, be
sure that your ODBC driver for Oracle is 32 bit and not 64 bit, which could
also result in a conflict.
HTH,
Marc
(eg. CSV files) that can be used by both
applications. I don't use Mathematica, so am unfamiliar with their, presumably
proprietary, formats.
HTH,
Marc Schwartz
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PLEASE do
information
specific to your platform relative to numerical characteristics.
HTH,
Marc Schwartz
On Jul 14, 2010, at 10:49 AM, Govind Chandra wrote:
Hi Peter,
Thanks for your response. Yes, I am interested in P-values smaller
than 1e-16. Below a certain value they may not tell much about
and the additional tools are available from:
http://cran.us.r-project.org/bin/macosx/tools/
As a future reference, since this issue is specific to OSX, you would be better
off posting to the R-sig-mac list:
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
HTH,
Marc Schwartz
on a similar query:
https://stat.ethz.ch/pipermail/r-help/2010-July/245291.html
HTH,
Marc Schwartz
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that 'Signif' is:
str(Signif)
Class 'noquote' atomic [1:2] ***
..- attr(*, legend)= chr 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
So you will need to coerce it to a vector before cbind()ing to a data frame:
as.vector(Signif)
[1] ***
HTH,
Marc Schwartz
HTH,
Marc Schwartz
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at the RCom package tools for this. This
provides greater flexibility in writing to the worksheets and cells.
See http://rcom.univie.ac.at/ for more information.
HTH,
Marc Schwartz
On Jul 13, 2010, at 4:09 PM, Felipe Carrillo wrote:
Check the WriteXLS package, I think it does that and also
, you can take advantage of built-in functionality to manipulate these files.
Of course using Sweave is yet another option.
HTH,
Marc Schwartz
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PLEASE do read the posting
* .58)
[1] 57.99289457
See R FAQ 7.31
HTH,
Marc Schwartz
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and provide commented
] November December
See ?LETTERS
HTH,
Marc Schwartz
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your query.
Regards,
Marc Schwartz
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(as.character(DF$Var), split = \\|), length)
[1] 1 1 1 1 1 1 2 3 1 2
and of course get the max value.
HTH,
Marc Schwartz
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,
Marc Schwartz
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to a list, yielding the argument names and values.
'expand.dots' is used to deal with the '...' args, if they exist.
HTH,
Marc Schwartz
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HTH,
Marc Schwartz
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I suspect that it was Intel's marketing department, after a few beers at the
local bar...
;-)
Regards,
Marc
On Jun 29, 2010, at 9:09 AM, Joris Meys wrote:
*slaps forehead*
Thanks. So out it goes, that hyperthreading. Who invented
hyperthreading on a quad-core anyway?
Cheers
Joris
, not a Date class object.
If you actually want the vector as a Date class object, but just 'format' the
output as YY-MM, then you can use:
# See ?as.Date and ?strptime
format(as.Date(x, format = %Y-%m-%d), %Y-%m)
[1] 2000-01 2000-01 2001-03
HTH,
Marc Schwartz
to tweak the sanitize.text.function argument in
print.xtable() to properly handle the backslashes.
HTH,
Marc Schwartz
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something like:
seq(as.Date(2010-07-29), length = 2, by = -4 months)
[1] 2010-07-29 2010-03-29
?
Note that the 'by' argument can be a negative interval. See the third bullet in
the Details section of ?seq.Date.
HTH,
Marc Schwartz
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of graphs as the final output so another term
makes sense. But what should it be?
Data analysis?
My 0.02€,
Liviu
Well yes, I've used it myself I think, but I was hoping for something a bit
'sexier'.
L'analyse des Données
Say it with a deep voice ;-)
Regards,
Marc
list for data base related
queries:
https://stat.ethz.ch/mailman/listinfo/r-sig-db
HTH,
Marc Schwartz
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).
On a more general level, since you are in a healthcare setting, you might also
want to point them to:
http://www.r-project.org/doc/R-FDA.pdf
which might provide additional comfort that R is being used for regulated
clinical trial activities.
HTH,
Marc Schwartz
setting and the
potential interactions that might be relevant. A search of the archives was
also not helpful.
I would suggest posting your query to the R-SIG-DB list, where you will avail
yourself of a more focused audience:
https://stat.ethz.ch/mailman/listinfo/r-sig-db
HTH,
Marc Schwartz
On Jun 17, 2010, at 11:46 AM, Barry Rowlingson wrote:
On Thu, Jun 17, 2010 at 5:11 PM, Frank E Harrell Jr
f.harr...@vanderbilt.edu wrote:
Pardon my english but you're working for idiots. I'd look elsewhere if
there are other options. IT departments should be here to help get things
done,
in, which discuss some of the faults in Calc, such as
rounding numbers close to 0 to 0 (like Excel does) and some of the non-IEEE
754 floating point behavior (like Excel does)...
HTH,
Marc Schwartz
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On Jun 17, 2010, at 4:29 PM, Ted Harding wrote:
On 17-Jun-10 20:36:27, Marc Schwartz wrote:
On Jun 17, 2010, at 3:03 PM, Ted Harding wrote:
The thread R licensing query currently running has raised
the classic critcisms of using Excel for statistics.
I was wondering: Has anyone applied
))
as the argument syntax. The same would apply for the x axis limits.
Is that what you are after?
HTH,
Marc Schwartz
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information.
HTH,
Marc Schwartz
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and provide commented, minimal, self-contained, reproducible
techniques.
HTH,
Marc Schwartz
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first.
Cheers
Joris
On Mon, Jun 14, 2010 at 2:55 PM, Marc Schwartz marc_schwa...@me.com wrote:
On Jun 13, 2010, at 10:20 PM, array chip wrote:
Hi, this is not R technical question per se. I know there are many
excellent statisticians in this list, so here my questions: I have dataset
directly to specify non-default arguments:
print(xtable(q5.tab, align = l|c), caption.placement = top,
table.placement = 'H')
See the help pages for ?xtable and ?print.table, including the last examples in
the former.
HTH,
Marc Schwartz
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-axis-labels_003f
HTH,
Marc Schwartz
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and provide commented, minimal, self-contained
as described above (3/10/10).
Felipe,
Do you want the report to be dated for the day that it is processed by latex?
If so, just use:
\today
to generate the current date at run time in the long format that you have above.
HTH,
Marc Schwartz
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Felipe,
I would not do the processing in TeX, but do it in R and then pass the results
to the \Sexpr{}'s.
If I am correctly understanding the process flow, put the following R code
chunk before the point where you need to output the formatted dates:
results=hide
START -
On Jun 10, 2010, at 12:19 PM, Marc Schwartz wrote:
Felipe,
I would not do the processing in TeX, but do it in R and then pass the
results to the \Sexpr{}'s.
If I am correctly understanding the process flow, put the following R code
chunk before the point where you need to output
On Jun 9, 2010, at 8:38 PM, TND (Ing. Marcos Ortiz Valmaseda) wrote:
Regards to all R-Help list
I ´m searching a R list on Spanish
Do you know any?
Regards and thanks a lot
Go here:
https://stat.ethz.ch/mailman/listinfo/r-help-es
HTH,
Marc Schwartz
, plot.points =
FALSE)
you can get something similar to the overlapping density plots in the 'sm'
package.
Food for thought.
HTH,
Marc Schwartz
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PLEASE do read
165.33
2 2 1.50 79.00
3 3 0.40 51.66
4 4 0.50 57.00
5 5 1.77 7.70
6 6 0.58 99.70
7 7 0.48160.00
8 8 1.04 84.00
9 9 1.93 87.00
10 10 0.43150.70
HTH,
Marc Schwartz
itself, if you want local display graphics.
I am not cognizant of other options, but will defer to others with more recent
Windows experience.
HTH,
Marc Schwartz
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PLEASE
, X11 port forwarding will be disabled
on the RHEL server side of things.
I see that Ted has also provided an excellent reply, so hopefully this might
supplement his in some fashion.
HTH,
Marc Schwartz
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https
consider contacting the rgl package maintainers to see if there is any
additional information that they can provide based upon their more intimate
knowledge.
Finally, there is a R SIG Fedora e-mail list. More info at:
https://stat.ethz.ch/mailman/listinfo/r-sig-fedora
HTH,
Marc Schwartz
built for your release, you tend to obviate
version incompatibility issues, as Prof. Ripley has noted.
HTH,
Marc Schwartz
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On Jun 3, 2010, at 10:38 AM, vaneet wrote:
I tried downloading the pre-built binaries of R from this website and then
installing the rpms but is seems they depend on so many other packages to be
installed first. I tried simply the R package first:
warning: R-2.11.0-1.el5.x86_64.rpm:
?
Thanks in advance
Alex van der Spek
combn(c(1, 3, 6, 9), 2)
[,1] [,2] [,3] [,4] [,5] [,6]
[1,]111336
[2,]369699
See ?combn
HTH,
Marc Schwartz
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lists is at:
https://stat.ethz.ch/mailman/listinfo/
The Posting Guide also has a question:
Which list: R-help, R-devel, or Bioconductor?
with some guidance on this point.
HTH,
Marc Schwartz
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TRUE FALSE FALSE
[78] TRUE TRUE FALSE TRUE TRUE TRUE TRUE FALSE FALSE FALSE FALSE
[89] FALSE FALSE FALSE FALSE TRUE FALSE TRUE FALSE TRUE TRUE FALSE
[100] TRUE
This avoids the looping involved in calling apply().
HTH,
Marc Schwartz
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character sets, rather than scrolling through them using the
default keyboard.
I hope that the above is helpful to folks. Needless to say, I do not present
the above as being the definitive reference, but it seems to be at least a
logical interpretation of the current situation.
Regards,
Marc
Ken,
See comments inline.
On Jun 1, 2010, at 2:25 PM, Ken Williams wrote:
Hi Marc,
I want to debate a couple points from your post:
1. Distribution of GPL covered applications is not permissible via the App
Store due to the Apple Terms of Service language, which infringes upon
rights
, not as a catalyst for a discussion on the
political aspects of this situation. So please, let's not go there... :-)
Regards,
Marc Schwartz
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?layout:
# Create a plot with 3 columns with uneven widths defined
layout(matrix(1:3, ncol = 3), widths = c(1/5, 2/5, 2/5))
# show the 3 regions
layout.show(3)
HTH,
Marc Schwartz
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configuration of your system correct.
Alternatively, if you have a local Linux SysAdmin that you can access, that
would be another option.
HTH,
Marc Schwartz
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not be aware, but Fedora 13 is scheduled for release tomorrow.
That means that in 30 days, Fedora 11 will go End of Life (EOL), which means no
further security fixes, patches, updates, etc. You will need to think about
moving to at least Fedora 12 RSN.
HTH,
Marc Schwartz
,
Marc Schwartz
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the fact that february has 28 days (or 29). Could
you please help?
Thank you very much in advance.
Kind regards,
Stella
Try recounting:
8 days remaining in February this year (not a leap year), after the 20th.
31 days in March
30 days in April
20 days in May
Total?
HTH,
Marc Schwartz
common
operations in R, that you are already comfortable doing in SAS.
HTH,
Marc Schwartz
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5 60 7 80 9 100
This presumes that both vectors are of the same length.
HTH,
Marc Schwartz
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,
Marc Schwartz
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the same x and y
axis ranges in each plot by using the 'xlim' and 'ylim' arguments to plot().
HTH,
Marc Schwartz
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be
appreciated.
- Fincher
On Fri, May 14, 2010 at 11:45, Marc Schwartz marc_schwa...@me.com wrote:
On May 14, 2010, at 9:59 AM, Justin Fincher wrote:
I have two datasets that I would like to plot in a single figure. The first
plot is generated by a function that then takes a subset
download
what appears to be stable release version RPMs here:
http://koji.fedoraproject.org/koji/buildinfo?buildID=168431
Martyn and Tom have worked hard to make CRAN and the EPEL repos compatible in
terms of the R RPM build process, so you should be fine from either source.
HTH,
Marc Schwartz
.
Use:
R --quiet
See:
http://cran.r-project.org/doc/manuals/R-intro.html#Invoking-R-from-the-command-line
for more information.
BTW, well past time to update your version of R...2.11.0 is current.
HTH,
Marc Schwartz
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for this.
?diff
diff(a, lag = 3)
[1] 43 3 5 -37 -7 -19 3
HTH,
Marc Schwartz
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...
HTH,
Marc Schwartz
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/ressources/emacs/mac
which might save you some time if you wish to update Emacs. I don't use it as I
build Emacs 23 from CVS, but a quick look suggests that he might not yet have
added the above help fix for R 2.11.0.
HTH,
Marc Schwartz
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: 60.162
Number of Fisher Scoring iterations: 4
Does that help top clarify?
Regards,
Marc Schwartz
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department web site on this:
http://biostat.mc.vanderbilt.edu/twiki/bin/view/Main/StatReport
Frank also has some pointers for converting between various formats:
http://biostat.mc.vanderbilt.edu/twiki/bin/view/Main/SweaveConvert
HTH,
Marc Schwartz
__
R
?substr and ?nchar
HTH,
Marc Schwartz
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-project.org [mailto:r-help-boun...@r-
project.org] On Behalf Of Marc Schwartz
Sent: Friday, April 30, 2010 5:04 PM
To: Sebastian Kruk
Cc: r-help@r-project.org; r-h...@stat.math.ethz.ch
Subject: Re: [R] drop last character in a names'vector
On Apr 30, 2010, at 5:44 PM, Sebastian Kruk wrote:
Hi, i
on your system, it is possible
that you still have the 32 bit version installed and that is what is being run.
You can check this by using:
.Machine$sizeof.pointer
If it returns 4, you are running 32 bit R and it if returns 8, 64 bit.
HTH,
Marc Schwartz
On Apr 28, 2010, at 3:38 PM, boris.vasil...@forces.gc.ca wrote:
-Original Message-
From: Marc Schwartz [mailto:marc_schwa...@me.com]
Sent: Monday, 26, April, 2010 13:47 PM
To: Vasiliev b...@cefcom h...@ottawa-hull
Cc: r-help@r-project.org; Ripley Prof Brian
Subject: Re: [R
,
Marc Schwartz
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,] 20.74 29.80 37.50 29.48 36.96 43.26
[4,] 24.16 33.60 40.94 32.76 39.92 46.14
[5,] 33.88 44.80 52.94 42.74 47.10 54.40
HTH,
Marc Schwartz
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On Apr 27, 2010, at 10:19 AM, Marc Schwartz wrote:
On Apr 27, 2010, at 10:05 AM, David Freedman wrote:
I've got a list of 5 matrices that are each 5 x 6. I'd like to end up with a
5 x 6 matrix that contains the mean value of the 5 original matrices. I can
do this by brute force
(result, Subject %in% c(JEFF, BG, John, Mary))
See ?subset and ?%in%
HTH,
Marc Schwartz
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that the information is still of value 6
years hence.
HTH,
Marc Schwartz
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