Re: [R] variance components

2008-08-19 Thread Pablo G Goicoechea
78934812 Hope this helps Pablo John Sorkin escribió: Please forgive the cross posting. I sent this to Medstats and have not received any response. I am looking for a good written explanation of components of variance (a.k.a va riance components), in particular as they are used i

[R] axis invertion

2007-11-22 Thread Juan Pablo Fededa
Hi all, I want to invert the y axis of a plot, how can I do that in an easy way? Thanks in advance, Juan Pablo __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org

[R] more outrageous plotting

2007-11-22 Thread Juan Pablo Fededa
Is this doable? Thanks in advance again, Juan Pablo __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] Rating R Helpers

2007-12-03 Thread Pablo G Goicoechea
among old timers themselves. Packages reviews are another issue. But if anybody is going through all that work, why not to make the appropriate corrections to the packages? They are GPL, aren't they? Best Pablo Mark Kimpel escribió: I'll throw one more idea into the mi

[R] vector generation

2008-01-17 Thread Juan Pablo Fededa
on, and so on. Is this doable in a simple way?? Thanks in advance again, Juan Pablo Fededa __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html a

[R] vector generation

2008-01-24 Thread Juan Pablo Fededa
Dear Contributors: I have the next vector: "Z" z = (526, 0.1, 110, 0.2, 34, 0.4, 614, 0.5, 1, 14, 15) I want to generate a vector containing the values higher than 1 corresponding to the z vector, wich in this case will mean to generate the next vector: (526, 110, 34, 614, 14, 15) If you ha

[R] two histograms in the same graph

2008-01-24 Thread Juan Pablo Fededa
Dear Contributors: I have two vectors x and z, and I want to display the histograms of both vectors in the same graph, x in red bars, z in blue bars. If you have any clue on how to do that, I will be very glad to hear it!! Thanks in advance again, Juan Pablo Fededa [[alternative

Re: [R] How to create a chromosome location map by locus ID

2009-01-15 Thread Pablo G Goicoechea
__ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] How to create a chromosome location map by locus ID

2009-01-15 Thread Pablo G Goicoechea
hanx Sake -- *Pablo G Goicoechea* Bioteknología Saila / /Dpto Biotecnología/ NEIKER-Tecnalia Apdo 46 01080 Vitoria-Gasteiz (SPAIN) Phone: +34 902 540 546 Fax: +34 902 540 547 pgoikoet...@neiker.net <mailto:pgoikoet...@neiker.net> __ R-help@r-pro

[R] value transformations in a vector

2008-05-15 Thread Juan Pablo Fededa
, Juan Pablo [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self

[R] Problems with quantreg and party package in 2.6.2 ver

2008-02-27 Thread Pablo Fernández Alvarez
I've problem with this pkg: - quantreg - party When i try to run this pkg under 2.6.2 (win 32). the system reports problems to reed the Rblas lib. (Not find the dynamic library links) Any suggestions to solve the problem ... tks, pablo. -- Pablo Fco. Fernández Al

Re: [R] tcltk issue remains

2008-04-07 Thread Pablo G Goicoechea
Hi Ingmar Have you opened X11? hope it helps Pablo Ingmar Visser escribió: > Dear R-help, > > I'm trying to load the fGarch package and keep running into problems > with tcltk: > > After succesfully instaling fGarch (and dependencies) I get: > > >library(fG

[R] filtering a simple matrix

2009-02-22 Thread Juan Pablo Fededa
Hi all, I have the next matrix: ab c 1223 2342 3054 4523 5022 6721 7120 8919 I want to filter the rows with the values of b higher than 1 in a way tha

[R] Interpreting GLM coefficients

2009-03-06 Thread Pablo Pita Orduna
38e-02 NA NA I would like to know if it is possible to extract the intercepts and the slopes for Year and Year^2 for this Model2. Thank you very much for your help. ____ Pablo Pita Orduna Gr

Re: [R] Interpreting GLM coefficients

2009-03-10 Thread Pablo Pita Orduna
Thank you very much! It helps a lot. You are right about the NA´s in the coefficients, the model needs some simplification. Thank you again. --- Pablo Pita Orduna Grupo de

[R] matrix filtering and reordering

2009-04-07 Thread Juan Pablo Fededa
to the file with same [x,1] value of blue, adding a cero in the case that there is no [x,1] corresponding value in the red matrixes (case for row 2 of blue). Thanks in advance, juan Juan Pablo Fededa [[alternative HTML version deleted]] __ R

[R] matrix merge problem

2009-04-14 Thread Juan Pablo Fededa
Dear r-help contributors, I have two questions: first: I have a matrix A and a vector B. I want to make a new matrix C, which is made of the rows of A having a value included in B. Second: I have two matrixes A and B, of different dimensions. B has unique values in column 2 and A has not uniqu

[R] how to partitioning a clustered heatmap

2009-08-07 Thread Fededa Juan Pablo
ng is something like this: heatmap.2(x, scale="none", cexRow=0.1, keysize=0.8, hclustfun = hclust, sepcolor="none",Colv=FALSE, dendrogram="row", trace=c("none"),density.info=c("none")) If you can help me, will be great. Thanks in advance, j

[R] Equivalent of Mathematica's Apply

2008-06-24 Thread Juan Pablo Romero Méndez
5 10 and I'd like to extract sequences 1:6, 2:7, 3:8, ..., 5:10 from a vector x. What would be the most compact way of achieving this? I've tried sapply(1:5, function(i) x[ind[i,1] : ind[i,2]]) Although sapply(1:5, function(i) x[seq(ind[i,])]) would be better (if i

Re: [R] Equivalent of Mathematica's Apply

2008-06-24 Thread Juan Pablo Romero Méndez
om: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On > Behalf Of Juan Pablo Romero Méndez > Sent: Tuesday, June 24, 2008 11:51 AM > To: [EMAIL PROTECTED] > Subject: [R] Equivalent of Mathematica's Apply > > Hello, > > Is there some equivalent function in R of Mathema

[R] Parallel R

2008-06-28 Thread Juan Pablo Romero Méndez
is very simple, it doesn't require any communication between parallel tasks; only that it divides simetricaly the task between the available cores. Also, I don't want to run the code in a cluster, just my multicore machine (4 cores). What solution would you propose, given your experience

Re: [R] Parallel R

2008-06-29 Thread Juan Pablo Romero Méndez
a/R-271/lib/R/library/pnmath/libs/pnmath.so': libgomp.so.1: shared object cannot be dlopen()ed Error: package/namespace load failed for 'pnmath' I find it odd, because libgomp.so.1 is in /usr/lib, so R should find it. Juan Pablo On Sun, Jun 29, 2008 at 1:36 AM, Martin Morg

Re: [R] Parallel R

2008-07-09 Thread Juan Pablo Romero Méndez
Just out of curiosity, what system do you have? These are the results in my machine: > system.time(exp(m), gcFirst=TRUE) user system elapsed 0.520.040.56 > library(pnmath) > system.time(exp(m), gcFirst=TRUE) user system elapsed 0.660 0.016 0.175 J

[R] problems installing rJava

2008-05-11 Thread Juan Pablo Romero Méndez
Hello, I'm having trouble installing rJava on R-2.6.1 / Suse10.3. What could be wrong? Regards, Juan Pablo This is the output of > install.packages("rJava", dependencies=T) --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... do