Re: [R] Plink bed files

2008-07-25 Thread Robert Gentleman
leted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Robert Gentleman, PhD Program in Computational Bi

Re: [R] Analyzing Publications from Pubmed via XML

2007-12-13 Thread Robert Gentleman
InternalNodes = TRUE) > sapply(c("//author", "//category"), xpathApply, doc = doc, fun = xmlValue) > > __ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide

Re: [R] KM estimation for interval censoring?

2008-01-28 Thread Robert Gentleman
HBERGER, M. Survival Analysis. New York: > Springer Verlag, 1997, for the algorithm. > > This MIT-CSAIL report says they have an available R package that handles > interval censoring and time-dependent covariates: > > http://dspace.mit.edu/bitstream/1721.1/33957/1/MIT-CSAIL-TR-2

Re: [R] Finding a path using the Graph package

2008-04-17 Thread Robert Gentleman
c cba cb bc. > > Thanks in advance, > > Dan > > __ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal,

Re: [R] warnings although R CMD check runs without any problem

2007-09-20 Thread Robert Gentleman
nce to a file, which triggers these messages, I > have currently no idea where to take a closer look at. Well, you did not give the whole output, and in it there really are names of files and locations. You can also use an editor to search for 1) any instance of the work exprSet or

Re: [R] Network Construction in R

2007-09-24 Thread Robert Gentleman
e most convenient way to construct this > network object? > > Thank you very much! > > Best, > -- Robert Gentleman, PhD Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M2-B876 PO Box 19024 Sea

Re: [R] linewidth in Rgraphviz

2007-10-05 Thread Robert Gentleman
I can probably figure this out given enough hours, but if someone were > able > to put together an example in a few minutes (or know that it's impossible > or very difficult) I would be grateful ... > > cheers > Ben Bolker > > > -- Robert Gentleman, PhD P

Re: [R] igraph and plotting connected components

2007-10-08 Thread Robert Gentleman
> > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained,

Re: [R] Rgraphviz

2007-11-15 Thread Robert Gentleman
e posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > -- Robert Gentleman, PhD Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M2-B87

Re: [R] step by step debugger in R?

2009-05-22 Thread Robert Gentleman
nows how to write a debugger plugin for Eclipse wants >> to help, we could have that fairly easily. All the infrastructure is >> there; it's the UI part that's missing. >> >> Duncan Murdoch > [I've copied Mark Bravington and Robert Gentleman to the li