I tried to calculate the pairwise pearson correlation of the column
vector of a matrix of 20,000 columns using the gpuCor fucntion from the
package gputools, and compare the speed with the ordinary cor function.
The gpuCor is supposed to be much faster than cor. But I found that the
ordinay cor is
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I tried to use gpuCor function in the gputools package of R to calcuate the
pairwise correlations of a matrix of 40,000 columns.
Becuase there would be memory issues if I use the whole matrix at a time, I
splitted the matrix into submatrix of 10,000 columns and then calculate the
pairwise correlat
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