[R] use one way ANOVA to select genes

2016-04-03 Thread hehsham alpukhity via R-help
i want to select the significant genes form  5 clusters (groups) by one way ANOVA  in r### # i want use One way ANOVA to select the siginificant from the clusters above  selectgene <-

[R] Export the result k-means cluster to CSV file

2016-03-24 Thread hehsham alpukhity via R-help
Hello Everyone : i have  done the clustering  process by k-means cluster, then i try to save[Export ] the groups of clustering, to txt, or CSV files , how i can do that #clusrer.data <- function(data,n) { miRNA.exp.cluster <- scale(t(miRNA.exp))

[R] generate levels with different number of replications with gl() function

2016-02-09 Thread hehsham alpukhity via R-help
I am trying to use the function gl (generate levels with different number of replications), generate different number of replications in each level.examplei have factor with this levels (BR,CNS ,CO,LE,ME,LC,OV,PR,RE),  and the replications is not the same , i want (4 replication for BR),( 6