[R] Help reg Genome view

2010-07-05 Thread mahalakshmi sivamani
Hi, I have a set of genes and its chromosomal physical position in a text file. I want to view those genes in the chromosome using R package GenePlotter. Could any one please tell how to view this. Thanks in advance. Yours sincerely, S.Mahalakshmi [[alternative HTML version deleted]]

[R] Hgu133acdf Installation Problem

2010-05-25 Thread mahalakshmi sivamani
Hi, While trying to install hgu133acdf- windows package in R im getting the following error and unable to install the same. > source("http://bioconductor.org/biocLite.R";) > biocLite("hgu133acdf") Using R version 2.10.0, biocinstall version 2.5.10. Installing Bioconductor version 2.5 packages

[R] help

2010-03-04 Thread mahalakshmi sivamani
Hi all , I have one query. i have list of some .cel files. in my program i have to mention the path of these .cel files part of my program is, rna.data<-exprs(justRMA(filenames=file.names, celfile.path=*datadir*, sampleNames=sample.names, phenoData=pheno.data, cdfname=cleancdfname(hg18_Affymet

[R] help

2010-03-01 Thread mahalakshmi sivamani
While loading files i am getting this type of error mentioned below. Error in file(file, "rt") : cannot open the connection In addition: Warning message: In file(file, "rt") : cannot open file 'D:/samplelist': No such file or directory could you please help me to resolve this problem.