[R] Using R to analyze multiple MRI studies

2014-07-03 Thread moleps islon
I need to analyze multiple T1 contrast enhanced MRI studies from different patients. They are all in DICOM format. I see that there are different packages for loading individual studies in DICOM format, however I have had limited luck so far researching how the different studies can be tranformed i

Re: [R] Plot survival analysis with time dependent variables

2012-12-31 Thread moleps islon
I did.But could only find the citation-not an implementation. On Tuesday, January 1, 2013, David Winsemius wrote: > > On Dec 31, 2012, at 4:38 PM, moleps wrote: > > Dear all, >> Is there an implementation of Simon & Makuch method of plotting the >> survival function with time-dependent variables

[R] MatchIt and sensitivity analysis

2011-02-10 Thread moleps islon
Dear all, Is there a package that allows me to run a sensitivy analysis on a matched dataset created using MatchIt? I am aware of both rbounds and the sensitivy function in the twang package but they do not allow matched objects from MatchIt as input. //M

Re: [R] SetInternet2, RCurl and proxy

2011-01-31 Thread moleps islon
011, moleps islon wrote: > >> Dear all, >> >> Using the SetInternet2(TRUE) option works wonders with R in my sealed >> down work-environment. However, I'd like to use RCurl and apparently >> the proxy settings are not carried over. Is it possible to figure out >

[R] SetInternet2, RCurl and proxy

2011-01-31 Thread moleps islon
Dear all, Using the SetInternet2(TRUE) option works wonders with R in my sealed down work-environment. However, I'd like to use RCurl and apparently the proxy settings are not carried over. Is it possible to figure out the proxy-IP and port number from R after invoking SetInternet2? //M

[R] Latex problem in Hmisc (3.8-1) and Mac Os X with R 2.11.1

2010-06-17 Thread moleps islon
Dear all, I did post this more or less identical mail in a follow up to another question I posted, but under another heading. I try again, but now under the correct header. upon running this code (from the Hmisc library-latex function) I believe the call to summary.formula is allright and produc

Re: [R] paste together a string object later to be utilized in a function

2010-06-07 Thread moleps islon
I'm sorry for not clearer describing my motive with this-- So this is what I'm trying to do- Take a survival object and utilize it in ggplot. ggkm<-function(time,event,stratum) { m2s<-Surv(time,as.numeric(event)) fit <- survfit(m2s ~ stratum) f$time<-fit$time f$surv<-fit$surv

Re: [R] Data manipulation problem

2010-04-07 Thread moleps islon
tion quite often whereby I need to add multiple columns based on another vector so I'd be very interested in another more general approach. //M On Tue, Apr 6, 2010 at 9:41 PM, David Winsemius wrote: > > On Apr 6, 2010, at 3:30 PM, David Winsemius wrote: > >> >> On Ap

Re: [R] Data manipulation problem

2010-04-06 Thread moleps islon
OK... next question.. Which is still a data manipulation problem so I believe the heading is still OK. ##So now I read my population data from excel. pop<-read.csv("pop.csv") typeof(pop) ## yields a list where I have age-specific population rows and a yearly column population, where the years are