Re: [R] A question on IRanges package

2014-04-03 Thread Qiang Kou
As I as I know, the type should be one of "any", "start", "end", "within", "equal". You are using a undefined type. Best, KK On Thu, Apr 3, 2014 at 2:48 PM, Yuan Luo wrote: > Hi All, > Sorry for possible spam, but I am trying to customize IRanges package > locally. For what I am doing, I int

[R] A question on IRanges package

2014-04-03 Thread Yuan Luo
Hi All, Sorry for possible spam, but I am trying to customize IRanges package locally. For what I am doing, I introduced another option to type parameters to the findOverlaps method. In the file findOverlaps-methods.R, I modified every instance of type = c("any", "start", "end", "within", "equal"),