Re: [R] Correlation between 2 matrices but with subset of variables

2012-03-09 Thread A Ezhil
Dear Peter, Thank you very much. Best regards, Ezhil --- On Fri, 3/9/12, Petr Savicky savi...@cs.cas.cz wrote: From: Petr Savicky savi...@cs.cas.cz Subject: Re: [R] Correlation between 2 matrices but with subset of variables To: r-help@r-project.org Date: Friday, March 9, 2012, 1:18 PM

[R] Correlation between 2 matrices but with subset of variables

2012-03-08 Thread A Ezhil
Dear All, I have two matrices A (40 x 732) and B (40 x 1230) and would like to calculate correlation between them.  I can use: cor(A,B, method=pearson) to calculate correlation between all possible pairs. But the issue is that there is one-many specific mappings between A and B and I just need

Re: [R] Correlation between 2 matrices but with subset of variables

2012-03-08 Thread R. Michael Weylandt
Well, it would be possible to set something up to select out just the right pairs each time, but on my system the following a - matrix(rnorm(40 * 732), 40) b - matrix(rnorm(40 * 1230), 40) system.time(cor(a,b,method = pearson)) takes about a tenth of a second so any more elective approach will

Re: [R] Correlation between 2 matrices but with subset of variables

2012-03-08 Thread A Ezhil
Thanks a lot, Michael.  --- On Fri, 3/9/12, R. Michael Weylandt michael.weyla...@gmail.com wrote: From: R. Michael Weylandt michael.weyla...@gmail.com Subject: Re: [R] Correlation between 2 matrices but with subset of variables To: A Ezhil ezhi...@yahoo.com Cc: r-help@r-project.org Date: Friday

Re: [R] Correlation between 2 matrices but with subset of variables

2012-03-08 Thread chuck.01
Example data would be helpful A Ezhil wrote Dear All, I have two matrices A (40 x 732) and B (40 x 1230) and would like to calculate correlation between them.  I can use: cor(A,B, method=pearson) to calculate correlation between all possible pairs. But the issue is that there is

Re: [R] Correlation between 2 matrices but with subset of variables

2012-03-08 Thread Petr Savicky
On Thu, Mar 08, 2012 at 03:57:06PM -0800, A Ezhil wrote: Dear All, I have two matrices A (40 x 732) and B (40 x 1230) and would like to calculate correlation between them. ?I can use: cor(A,B, method=pearson) to calculate correlation between all possible pairs. But the issue is that there