Re: [R] Group rows by common ID and plot?

2011-02-25 Thread DB1984
So to simplify this a bit: Using dataframe: name x1 x2 x3 x4 x5 x6 x7 x8 1 fred 2 3 4 6 7 8 9 12 2 fred 4 5 6 8 9 10 11 14 3 fred 6 7 8 10 11 12 13 16 4 fred 8 9 10 12 13 14 15 18 5 james 10 11 12 14 15 16 17 20 6 james 12 13 14 16 17 18 19 22 7 james 14 15 16 18

Re: [R] Group rows by common ID and plot?

2011-02-25 Thread DB1984
Thanks Mike - this doesn't quite do it, but I think that you've hit of the right method. I am just trying to use 'plot' initially - I don't care so much about the arrangement in the file. plot(df$y,group=df$f) outputs the Y column in the appropriate plot. What I would like to do is have 10 Y col

Re: [R] Group rows by common ID and plot?

2011-02-25 Thread Scott Chamberlain
I imagine you want the ggplot2 package. something like: ggplot(dataframe, aes(x = yourxvar, y = youryvar)) + geom_point() + facet_wrap(~ ProbeSet.ID) Or facet_grid(), either of which makes a different panel for each unique level of ProbeSet.ID see gggplot help here: http://had.co.nz/ggplot2/

Re: [R] Group rows by common ID and plot?

2011-02-25 Thread Mike Marchywka
> Date: Thu, 24 Feb 2011 13:28:18 -0800 > From: dannyb...@gmail.com > To: r-help@r-project.org > Subject: Re: [R] Group rows by common ID and plot? > does this do what you want?  library("lattice") df<-data.f

Re: [R] Group rows by common ID and plot?

2011-02-24 Thread DB1984
In terms of a reproducible example: ProbeSet.ID.F ProbeSet.ID Feature.ID Gene.Symbol X0030V120810.4 X0143V120110.4 X0258V111710.4 X0283V111710.4 X0430V120710.4 X0472V111610.4 X0520V111610.4 X0546V113010.4 X0578V111810.4 X0624V111810.4 7896741_479302 7896741 479302 OR4F17

[R] Group rows by common ID and plot?

2011-02-23 Thread DB1984
Suspect that this is easier than I realize, but taking some figuring out currently. Any help would be appreciated. I have a data frame (testhm) with many rows such as: ProbeSet.ID.F ProbeSet.ID Feature.ID G.S X0030V120810.14 X0143V120110.14 X0258V111710.14 X0283V111710.14 X0430V120710.14 X047