Re: [R] Large data set

2012-07-23 Thread arun
HI, You can try dbLoad() from hash package.  Not sure whether it will be successful. A.K. - Original Message - From: Lorcan Treanor To: r-help@r-project.org Cc: Sent: Monday, July 23, 2012 8:02 AM Subject: [R] Large data set Hi all, Have a problem. Trying to read in a data set

Re: [R] Large data set

2012-07-23 Thread jim holtman
First of all, try to determine the smallest file you can read with an empty workspace. Once you have done that, then break up your file into that size sets and read them in. The next question is what do you want to do with 112M rows of data. Can you process them a set a time and then aggregate t

[R] Large data set

2012-07-23 Thread Lorcan Treanor
Hi all, Have a problem. Trying to read in a data set that has about 112,000,000 rows and 8 columns and obviously enough it was too big for R to handle. The columns are mode up of 2 integer columns and 6 logical columns. The text file is about 4.2 Gb in size. Also I have 4 Gb of RAM and 218 Gb of a

Re: [R] large data set (matrix) using image()

2011-12-29 Thread Uwe Ligges
Works perfectly well with R-2.14.1 32-bit on a Windows device. Since you have not followed the posting guide and forgot to give details about your platform, there is not much we can do. Uwe Ligges On 22.12.2011 23:08, Karen Liu wrote: When I use the image() function for a relatively small

[R] large data set (matrix) using image()

2011-12-22 Thread Karen Liu
When I use the image() function for a relatively small matrix it works perfectly, eg.x <- 1:100 > z <- matrix(rnorm(10^4),10^2,10^2) > image(x=x,y=x,z=z,col=rainbow(3))but when I want to plot a larger matrix, it > doesn't really work. Most of the times, it just plot a few intermitent > points.x

Re: [R] Large data set in R

2009-03-02 Thread Hardi
Thanks Kjetil. This is exactly what I wanted. Hardi From: Kjetil Halvorsen Cc: r-help Sent: Monday, March 2, 2009 9:45:43 PM Subject: Re: [R] Large data set in R install.packages("biglm", dep=TRUE) library(help=biglm) kjetil Hello, I&#

Re: [R] Large data set in R

2009-03-02 Thread Kjetil Halvorsen
install.packages("biglm", dep=TRUE) library(help=biglm) kjetil On Mon, Mar 2, 2009 at 7:06 AM, Hardi wrote: > > Hello, > > I'm trying to use R statistical packages to do ANOVA analysis using aov() > and lm(). > I'm having a problem when I have a large data set for input data from Full > Factori

[R] Large data set in R

2009-03-02 Thread Hardi
Hello, I'm trying to use R statistical packages to do ANOVA analysis using aov() and lm(). I'm having a problem when I have a large data set for input data from Full Factorial Design Experiment with replications. R seems to store everything in the memory and it fails when memory is not enough

Re: [R] Large Data Set Help

2008-08-25 Thread Charles C. Berry
On Mon, 25 Aug 2008, Roland Rau wrote: Hi, Jason Thibodeau wrote: I am attempting to perform some simple data manipulation on a large data set. I have a snippet of the whole data set, and my small snippet is 2GB in CSV. Is there a way I can read my csv, select a few columns, and write it

Re: [R] Large Data Set Help

2008-08-25 Thread Roland Rau
Hi, Jason Thibodeau wrote: I am attempting to perform some simple data manipulation on a large data set. I have a snippet of the whole data set, and my small snippet is 2GB in CSV. Is there a way I can read my csv, select a few columns, and write it to an output file in real time? This is what

Re: [R] Large Data Set Help

2008-08-25 Thread jim holtman
Establish a "connection" with the file you want to read, read in 1,000 rows (or whatever you want). If you are using read.csv and there is a header, you might want to skip it initially since there will be no header when you read the next 1000 rows. Also put 'as.is=TRUE" so that character fields a

[R] Large Data Set Help

2008-08-25 Thread Jason Thibodeau
I am attempting to perform some simple data manipulation on a large data set. I have a snippet of the whole data set, and my small snippet is 2GB in CSV. Is there a way I can read my csv, select a few columns, and write it to an output file in real time? This is what I do right now to a small test