On Tue, Jan 27, 2009 at 11:04 AM, Marce wrote:
> 2009/1/27 Rainer M Krug :
>> On Tue, Jan 27, 2009 at 2:30 AM, Peter Waltman
>> wrote:
>>> Hi -
>>>
>>> I saw your posting on the R-help mailing list. Were you ever able to get
>>> this working? did you end up switching to use the rsge library?
>
2009/1/27 Rainer M Krug :
> On Tue, Jan 27, 2009 at 2:30 AM, Peter Waltman
> wrote:
>> Hi -
>>
>> I saw your posting on the R-help mailing list. Were you ever able to get
>> this working? did you end up switching to use the rsge library?
>
> Yes - that is exactly what I did - I am using rsge or
On Tue, Jan 27, 2009 at 2:30 AM, Peter Waltman wrote:
> Hi -
>
> I saw your posting on the R-help mailing list. Were you ever able to get
> this working? did you end up switching to use the rsge library?
Yes - that is exactly what I did - I am using rsge or, which is in
most cases sufficient fo
Hi -
I saw your posting on the R-help mailing list. Were you ever able to get
this working? did you end up switching to use the rsge library?
I'm trying to do the same, and not having very much luck getting it going.
Thanks!
Peter Waltman
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On Fri, Dec 5, 2008 at 12:11 AM, Sean Davis <[EMAIL PROTECTED]> wrote:
> On Thu, Dec 4, 2008 at 5:21 AM, Rainer M Krug <[EMAIL PROTECTED]> wrote:
>> Did you make any progress in using R in the SGE / OpenMPI environment?
>> I am asking, because I am struggling with the same problem. Using qsub
>> do
On Thu, Dec 4, 2008 at 5:21 AM, Rainer M Krug <[EMAIL PROTECTED]> wrote:
> Did you make any progress in using R in the SGE / OpenMPI environment?
> I am asking, because I am struggling with the same problem. Using qsub
> does not give me an interactive session which I can use (wherefore I
> don't s
Did you make any progress in using R in the SGE / OpenMPI environment?
I am asking, because I am struggling with the same problem. Using qsub
does not give me an interactive session which I can use (wherefore I
don't see a way of using RMPISNOW and getMPIcluster()) and the
spawning (makeMPIcluster(
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Hi,
actually there is no perfect way to use R one multiprocessors. There are
two options:
* using mpi: This means starting several R sessions and using MPI for
the communication between the R sessions. Task distribution, fail over
solutions, ... have
On Thu, Oct 9, 2008 at 9:02 AM, Dirk Eddelbuettel <[EMAIL PROTECTED]> wrote:
> You could have a look at the slides from my UseR! 2008 tutorial [1] on
> 'high-performance computing with R' which covered Open MPI / Rmpi and
> includes examples.
>
> It may just be that you are expecting something that
On 9 October 2008 at 09:18, Sean Davis wrote:
| We have spent some time setting up Sun Grid Engine and OpenMPI on a
| group of linux boxes. I have created a parallel environment and
| everything seems to be working. I have Rmpi 0.5.5-5 installed on all
| machines. I would like to start an inter
We have spent some time setting up Sun Grid Engine and OpenMPI on a
group of linux boxes. I have created a parallel environment and
everything seems to be working. I have Rmpi 0.5.5-5 installed on all
machines. I would like to start an interactive R session using, say,
8 processors and then star
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