Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-07-02 Thread Liaw, Andy
, July 01, 2010 12:48 PM *To:* Liaw, Andy *Cc:* r-help *Subject:* Re: [R] anyone know why package RandomForest na.roughfix is so slow?? Andy,     You're right, I didn't supply any code, because my call was very simple and it was the call itself at question.  However, here is the associated

Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-07-01 Thread Liaw, Andy
: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On Behalf Of Mike Williamson Sent: Wednesday, June 30, 2010 7:53 PM To: r-help Subject: [R] anyone know why package RandomForest na.roughfix is so slow?? Hi all, I am using the package random forest for random forest

Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-07-01 Thread Mike Williamson
] On Behalf Of Mike Williamson Sent: Wednesday, June 30, 2010 7:53 PM To: r-help Subject: [R] anyone know why package RandomForest na.roughfix is so slow?? Hi all, I am using the package random forest for random forest predictions. I like the package. However, I have fairly large data

Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-07-01 Thread Liaw, Andy
-help Subject: [R] anyone know why package RandomForest na.roughfix is so slow?? Hi all, I am using the package random forest for random forest predictions. I like the package. However, I have fairly large data sets, and it can

Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-07-01 Thread Mike Williamson
-project.org [mailto:r-help-boun...@r-project.org] On Behalf Of Mike Williamson Sent: Wednesday, June 30, 2010 7:53 PM To: r-help Subject: [R] anyone know why package RandomForest na.roughfix is so slow?? Hi all, I am using the package random forest for random forest predictions. I

Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-07-01 Thread Hadley Wickham
*Subject:* Re: [R] anyone know why package RandomForest na.roughfix is so slow?? Andy,     You're right, I didn't supply any code, because my call was very simple and it was the call itself at question.  However, here is the associated code I am using:         naFixTime - system.time

Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-07-01 Thread Mike Williamson
], myroughfixed[[myresponse]],...) HTH, Andy -Original Message- From: r-help-boun...@r-project.org [mailto: r-help-boun...@r-project.org] On Behalf Of Mike Williamson Sent: Wednesday, June 30, 2010 7:53 PM To: r-help Subject: [R] anyone know why package RandomForest na.roughfix

[R] anyone know why package RandomForest na.roughfix is so slow??

2010-06-30 Thread Mike Williamson
Hi all, I am using the package random forest for random forest predictions. I like the package. However, I have fairly large data sets, and it can often take *hours* just to go through the na.roughfix call, which simply goes through and cleans up any NA values to either the median

Re: [R] anyone know why package RandomForest na.roughfix is so slow??

2010-06-30 Thread jim holtman
Use Rprof to determine where time is being spent. This might point out some problems in the code. On Wed, Jun 30, 2010 at 7:53 PM, Mike Williamson this.is@gmail.com wrote: Hi all,    I am using the package random forest for random forest predictions.  I like the package.  However, I have