Hi,
I wanted to compare the quality of biclusters obtained from the various
biclustering algorithms. Is there a function/metric in biclust (or some other
package) that will enable me to do this?
thanks!
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> "UweL" == Uwe Ligges
> on Fri, 26 Feb 2010 17:24:43 +0100 writes:
UweL> On 26.02.2010 17:04, linda garcia wrote:
>> Dear all,
>> I am using biclust package for biclustering. I wanted to
>> know how can I extract my clusters from the object?
>>
>>
>> lib
On 26.02.2010 17:04, linda garcia wrote:
Dear all,
I am using biclust package for biclustering. I wanted to
know how can I extract my clusters from the object?
library(biclust)
test<- matrix(rnorm(5000), 100, 50)
test[11:20,11:20]<- rnorm(100, 3, 0.1)
loma<- binarize(test,
Dear all,
I am using biclust package for biclustering. I wanted to
know how can I extract my clusters from the object?
library(biclust)
test <- matrix(rnorm(5000), 100, 50)
test[11:20,11:20] <- rnorm(100, 3, 0.1)
loma <- binarize(test,2)
res <- biclust(x=loma, method=BCBimax()
Hi,
I was trying to draw a heatmap of the bicluster results. With the code given in
the biclust package I can only get the heatmap for one cluster at a time
(drawHeatmap function). Is there any way that I can get the heatmap for all the
clusters at the same time?
The code that I am using (biclu
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