Hi Gavin,
It might help to push the label away from the arrow head a little bit:
ordilabel(pl$arrows * 1.075)
This seems to do a pretty good job.
will push the label 7.5% away from the arrow head.
It seems that that is the best we can currently do with vegan.
When you say that this is not
It *really* does help to read the documentation for functions. Like most
of the functions in vegan that extract information from ordinations,
ordilabel() extracts information for axes 1 and 2 only, by default.
Does
ordilabel(pl$arrows, choices = 1:3)
work for you?
G
Thanks for the suggestion.
It *really* does help to read the documentation for functions. Like most
of the functions in vegan that extract information from ordinations,
ordilabel() extracts information for axes 1 and 2 only, by default.
Does
ordilabel(pl$arrows, choices = 1:3)
work for you?
G
Thanks for the suggestion.
On Tue, 2011-09-13 at 05:18 -0700, Briony wrote:
It *really* does help to read the documentation for functions. Like most
of the functions in vegan that extract information from ordinations,
ordilabel() extracts information for axes 1 and 2 only, by default.
It also helps if I read the docs
Thank you very much for the suggestion. And while I'm here, thank you for
vegan and the documentation that goes with it.
I tried ordilabel(pl$arrows) but the labels only seem to be in two
dimensions.
I'm not a skilled enough user of R to edit the ordixyplot function - so I'll
pass on that
Please quote the prior thread, otherwise readers of this mailing list
will not get the context.
Uwe Ligges
On 12.09.2011 01:41, Briony wrote:
Thank you very much for the suggestion. And while I'm here, thank you for
vegan and the documentation that goes with it.
I tried
Thank you very much for the suggestion. And while I'm here, thank you for
vegan and the documentation that goes with it.
Function ordiplot3d uses scatterplot3d, and it returns also all
scatterplot3d items, like functions xyz.converter and points3d that
can be used for tuning labels.
I tried
On Mon, 2011-09-12 at 03:24 -0700, Briony wrote:
Thank you very much for the suggestion. And while I'm here, thank you for
vegan and the documentation that goes with it.
Function ordiplot3d uses scatterplot3d, and it returns also all
scatterplot3d items, like functions xyz.converter and
Briony brionynorton at gmail.com writes:
Hi R experts,
I'm looking for some help with plotting vectors from envfit in vegan, onto a
3d plot using ordiplot3d. So far I have
data.mds - metaMDS(data, k=3,trace = FALSE)
vect_data-envfit(data.mds,vegdata[,3:21],choices=1:3,permu=)
Hi R experts,
I'm looking for some help with plotting vectors from envfit in vegan, onto a
3d plot using ordiplot3d. So far I have
data.mds - metaMDS(data, k=3,trace = FALSE)
vect_data-envfit(data.mds,vegdata[,3:21],choices=1:3,permu=)
ordiplot3d(data.mds,envfit=vect_data)
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