subject:"\[R\] glmnet package\: penalty.factor option"

Re: [R] glmnet package: penalty.factor option

2011-04-27 Thread Breheny, Patrick

oject.org Subject: [R] glmnet package: penalty.factor option Anyone have experience specifying the "penalty.factor" option in the "glmnet" command? I have 3 variables (out of a million genotype variables) that I want to force into the model (i.e., set penalty factor to 0), but I ca

[R] glmnet package: penalty.factor option

2011-04-27 Thread Brian H. Chen

Anyone have experience specifying the "penalty.factor" option in the "glmnet" command? I have 3 variables (out of a million genotype variables) that I want to force into the model (i.e., set penalty factor to 0), but I can't figure out how to do that. [[alternative HTML version deleted]]