Re: [R] inconsistency in mclapply.....

2023-06-20 Thread akshay kulkarni
] inconsistency in mclapply. � Sat, 17 Jun 2023 18:54:43 + akshay kulkarni �: > 1. I was working on a two core machine just to test the > code...tomorrow will be switching to a 48 core machine. Should I > again download the latest openblas from ropenblas() or do you suggest

Re: [R] inconsistency in mclapply.....

2023-06-17 Thread Ivan Krylov
В Sat, 17 Jun 2023 18:54:43 + akshay kulkarni пишет: > 1. I was working on a two core machine just to test the > code...tomorrow will be switching to a 48 core machine. Should I > again download the latest openblas from ropenblas() or do you suggest > testing the native openblas that is

Re: [R] inconsistency in mclapply.....

2023-06-17 Thread akshay kulkarni
1.4 pkgconfig_2.0.3 From: Ivan Krylov Sent: Saturday, June 10, 2023 7:50 PM To: akshay kulkarni Cc: R help Mailing list Subject: Re: [R] inconsistency in mclapply. On Sat, 10 Jun 2023 13:46:12 + akshay kulkarni wrote: >What if I

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread akshay kulkarni
Dear Ivan, A million thanks for your precious time Thanking you Yours sincerely, AkshayMKulkarni From: Ivan Krylov Sent: Saturday, June 10, 2023 7:50 PM To: akshay kulkarni Cc: R help Mailing list Subject: Re: [R] inconsistency

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread Ivan Krylov
On Sat, 10 Jun 2023 13:46:12 + akshay kulkarni wrote: >What if I switch to Ubuntu? > I had a similar ( but not exactly the same) problem way back in 2018 > and switching to Ubuntu solved it. You shouldn't have to switch distros for problems like this one. What you need

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread akshay kulkarni
:42 PM To: akshay kulkarni Cc: R help Mailing list Subject: Re: [R] inconsistency in mclapply. On Sat, 10 Jun 2023 11:49:10 + akshay kulkarni wrote: > (gdb) backtrace > #0 0x7f94b6454053 in gomp_team_barrier_wait_end () from > /lib64/libgomp.so.1 > #1 0x

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread Ivan Krylov
On Sat, 10 Jun 2023 11:49:10 + akshay kulkarni wrote: > (gdb) backtrace > #0 0x7f94b6454053 in gomp_team_barrier_wait_end () from > /lib64/libgomp.so.1 > #1 0x7f94b6452a7d in gomp_team_end () from /lib64/libgomp.so.1 > #2 0x7f94b3c280cf in exec_blas () from

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread akshay kulkarni
, June 10, 2023 2:46 PM To: akshay kulkarni Cc: R help Mailing list Subject: Re: [R] inconsistency in mclapply. On Sat, 10 Jun 2023 08:42:37 + akshay kulkarni wrote: > This is the output of top when I run function LOWp() with mclapply > also in it. it hangs: > %Cpu0 : 0.0 us

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread Ivan Krylov
On Sat, 10 Jun 2023 08:42:37 + akshay kulkarni wrote: > This is the output of top when I run function LOWp() with mclapply > also in it. it hangs: > %Cpu0 : 0.0 us, 0.3 sy, 0.0 ni, 99.7 id, 0.0 wa, 0.0 hi, 0.0 > si, 0.0 st > %Cpu1 : 0.0 us, 0.0 sy, 0.0 ni,100.0 id, 0.0 wa, 0.0

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread akshay kulkarni
Ivan Krylov Sent: Saturday, June 10, 2023 12:54 PM To: akshay kulkarni Cc: R help Mailing list Subject: Re: [R] inconsistency in mclapply. On Fri, 9 Jun 2023 21:19:11 + akshay kulkarni wrote: > debug at #26: LYG <- mclapply(LYGH, FUN = arfima, mc.cores = 2, > mc.preschedul

Re: [R] inconsistency in mclapply.....

2023-06-10 Thread Ivan Krylov
On Fri, 9 Jun 2023 21:19:11 + akshay kulkarni wrote: > debug at #26: LYG <- mclapply(LYGH, FUN = arfima, mc.cores = 2, > mc.preschedule = FALSE) > Browse[2]> LYG <- pbmclapply(LYGH,FUN = arfima,mc.cores = > 2,mc.preschedule = FALSE) > | | 0%,

Re: [R] inconsistency in mclapply.....

2023-06-09 Thread Eric Berger
nking you, > Yours sincerely, > AKSHAY M KULKARNI > > > ____ > From: Ivan Krylov > Sent: Saturday, June 10, 2023 1:43 AM > To: akshay kulkarni > Cc: R help Mailing list > Subject: Re: [R] inconsistency in mclapply. > > On Fri, 9 Jun

Re: [R] inconsistency in mclapply.....

2023-06-09 Thread akshay kulkarni
e deadlines, right? THanking you, Yours sincerely, AKSHAY M KULKARNI From: Ivan Krylov Sent: Saturday, June 10, 2023 1:43 AM To: akshay kulkarni Cc: R help Mailing list Subject: Re: [R] inconsistency in mclapply. On Fri, 9 Jun 2023 18:01:44 + aksh

Re: [R] inconsistency in mclapply.....

2023-06-09 Thread Ivan Krylov
On Fri, 9 Jun 2023 18:01:44 + akshay kulkarni wrote: > > LYG <- pbmclapply(LYGH,FUN = arfima,mc.cores = 2,mc.preschedule = > > FALSE) > | > > | > 0%, ETA NA^ > > It just hangs. My questions from the

Re: [R] inconsistency in mclapply.....

2023-06-09 Thread akshay kulkarni
the hood? THanking you,Yours sincerely,AKSHAY M KULKARNI From: R-help on behalf of akshay kulkarni Sent: Friday, June 9, 2023 11:31 PM To: R help Mailing list Subject: [R] inconsistency in mclapply. Dear members, I am using pbmcapply

[R] inconsistency in mclapply.....

2023-06-09 Thread akshay kulkarni
Dear members, I am using pbmcapply to parellise my code. But the following code doesn't work: > LYG <- pbmclapply(LYGH,FUN = arfima,mc.cores = 2,mc.preschedule = FALSE) |