I am trying to prepare a bed file to load as accustom track on the
UCSC genome browser.
I have a data frame that looks like the one below.
x
V1V2 V3
1 chr1 11255 55
2 chr1 11320 29
3 chr1 11400 45
4 chr2 21680 35
5 chr2 21750 84
6 chr2 21820 29
7 chr2 31890 46
8 chr3 32100
Try this and see if it is what you want:
x - read.table(textConnection( V1V2 V3
1 chr1 11255 55
2 chr1 11320 29
3 chr1 11400 45
4 chr2 21680 35
5 chr2 21750 84
6 chr2 21820 29
7 chr2 31890 46
8 chr3 32100 29
9 chr3 52380 29
10 chr3 66450 46 ), header=TRUE)
cat(browser position
Hi Jim
I am trying to prepare a bed file to load as accustom track on the UCSC genome
browser.
I have a data frame that looks like the one below.
x
V1V2 V3
1 chr1 11255 55
2 chr1 11320 29
3 chr1 11400 45
4 chr2 21680 35
5 chr2 21750 84
6 chr2 21820 29
7 chr2 31890 46
8 chr3 32100 29
9
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