elp-boun...@r-project.org] On Behalf Of Faradj Koliev
>> Sent: July 27, 2016 4:50 AM
>> To: r-help@r-project.org
>> Subject: [R] Likelihood ratio test in porl (MASS)
>>
>> Dear all,
>>
>> A quick question: Let’s say I have a full and a restricted
lps,
John
-
John Fox, Professor
McMaster University
Hamilton, Ontario
Canada L8S 4M4
Web: socserv.mcmaster.ca/jfox
> -Original Message-
> From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Faradj Koliev
> Sent: July 27, 2016 4:50 AM
> To: r-help@r-project.org
>
On Wed, 27 Jul 2016, Faradj Koliev wrote:
Dear all,
A quick question: Let?s say I have a full and a restricted model that looks something like this:
Full<- polr(Y ~ X1+X2+X3+X4, data=data, Hess = TRUE, method="logistic?) # ordered logistic regression
Restricted<- polr(Y ~ X1+X2+X3,
Dear all,
A quick question: Let’s say I have a full and a restricted model that looks
something like this:
Full<- polr(Y ~ X1+X2+X3+X4, data=data, Hess = TRUE, method="logistic”) #
ordered logistic regression
Restricted<- polr(Y ~ X1+X2+X3, data=data, Hess = TRUE, method="logistic”) #
Hello,
I am so sorry, but I have been struggling with the code for the entire day.
I have a very simple dataset that looks like this:
response=c(45,47,24,35,47,56,29)
sub=c(A,A,B,B,C,C,C£©
time=c(1,2,1,2,1,2,3)
gdata=cbind(response,sub,time)
Namely, for three subjects, each has 2 or 3
Amanda Li amandali at uchicago.edu writes:
Hello,
I am so sorry, but I have been struggling with
the code for the entire day.
I have a very simple dataset that looks like this:
response=c(45,47,24,35,47,56,29)
sub=c(A,A,B,B,C,C,C£©
time=c(1,2,1,2,1,2,3)
Dear All,
I fitted two non-nested proportional hazards models using the coxph()
function from package survival. Now, I would like to apply a model
selection test like, e.g., the likelihood ratio test proposed by Vuong.
I found an implementation of Vuong's test in the package 'pscl', but
that
Hello there,
I want to perform a likelihood ratio test to check if a single exponential
or a sum of 2 exponentials provides the best fit to my data. I am new to R
programming and I am not sure if there is a direct function for doing this
and whats the best way to go about it?
#data
x - c(1 ,10,
Hi Diviya,
Take a look at the lrtest function in the lmtest package:
install.packages('lmtest)
require(lmtest)
?lrtest
HTH,
Jorge
On Sun, Jun 12, 2011 at 1:16 PM, Diviya Smith wrote:
Hello there,
I want to perform a likelihood ratio test to check if a single exponential
or a sum of 2
On Sun, 12 Jun 2011, Jorge Ivan Velez wrote:
Hi Diviya,
Take a look at the lrtest function in the lmtest package:
install.packages('lmtest)
require(lmtest)
?lrtest
Yes, when you have to nls() fits, say m1 and m2, you can do
lrtest(m1, m2)
However, I don't think that both m1 and m2 can be
Dear R-help,
Can anybody tell me which R package has Lo-Mendell Rubin LR test and Bootstrap
LR test to compare the model fit between k class and k+1 class model for Latent
class analysis?
Thanks in advance,
warn regards,Ms.Karunambigai M
PhD Scholar
Dept. of Biostatistics
NIMHANS
Bangalore
karuna m m_karuna2002 at yahoo.com writes:
Can anybody tell me which R package has Lo-Mendell Rubin LR test and
Bootstrap
LR test to compare the model fit between k class and k+1 class model
for Latent class analysis?
I don't know, but
library(sos)
findFn(Lo-Mendell)
findFn({latent
I am currently running a generalized linear mixed effect model using glmer and
I want to estimate how much of the variance is explained by my random factor.
summary(glmer(cbind(female,male)~date+(1|dam),family=binomial,data= liz3))
Generalized linear mixed model fit by the Laplace
Based on a discussion found on the R mailing list but dating back to 2008, I
have compared the log-likelihoods of the glm model and of the glmer model as
follows:
lrt - function (obj1, obj2){
L0 - logLik(obj1)
L1 - logLik(obj2)
L01 - as.vector(- 2 * (L0 - L1))
df - attr(L1, df) -
Thanks for this answer but does that mean that working with the deviances is
better? Or how else could I evaluate the importance of my random terms?
Many thanks,
Davnah
On Mar 14, 2010, at 8:12 PM, hadley wickham wrote:
Based on a discussion found on the R mailing list but dating back
Davnah Urbach Davnah.Urbach at dartmouth.edu writes:
Thanks for this answer but does that mean that working
with the deviances is better? Or how else could I
evaluate the importance of my random terms?
You should probably (a) search the archives of the
r-sig-mixed-models mailing list
and
Hi!
I am working on the Logistic Regression using R. My R script is as follows
ONS - read.csv(ONS.csv,header = TRUE)
ONS.glm - glm(Y ~ Age1+Age2+Sex+Education+Profession+TimeInJob+
Hi!
I am working on the Logistic Regression using R. My R script is as follows
ONS - read.csv(ONS.csv,header = TRUE)
ONS.glm - glm(Y ~ Age1+Age2+Sex+Education+Profession+TimeInJob+
For the third one:
?anova.glm
test=Chisq will be LRT.
For the first two, you can have the answer from ordinary stat book.
On Wed, Nov 5, 2008 at 1:11 PM, Maithili Shiva [EMAIL PROTECTED] wrote:
Hi!
I am working on the Logistic Regression using R. My R script is as follows
ONS -
This particular case with a random intercept model can be handled by
glmmML, by bootstrapping the p-value.
Best, Göran
On Thu, Jul 17, 2008 at 1:29 PM, Douglas Bates [EMAIL PROTECTED] wrote:
On Thu, Jul 17, 2008 at 2:50 AM, Rune Haubo [EMAIL PROTECTED] wrote:
2008/7/16 Dimitris Rizopoulos
2008/7/16 Dimitris Rizopoulos [EMAIL PROTECTED]:
well, for computing the p-value you need to use pchisq() and dchisq() (check
?dchisq for more info). For model fits with a logLik method you can directly
use the following simple function:
lrt - function (obj1, obj2) {
L0 - logLik(obj1)
On Thu, Jul 17, 2008 at 2:50 AM, Rune Haubo [EMAIL PROTECTED] wrote:
2008/7/16 Dimitris Rizopoulos [EMAIL PROTECTED]:
well, for computing the p-value you need to use pchisq() and dchisq() (check
?dchisq for more info). For model fits with a logLik method you can directly
use the following
Dear list,
I am fitting a logistic multi-level regression model and need to test the
difference between the ordinary logistic regression from a glm() fit and the
mixed effects fit from glmer(), basically I want to do a likelihood ratio test
between the two fits.
The data are like this:
My
well, for computing the p-value you need to use pchisq() and dchisq()
(check ?dchisq for more info). For model fits with a logLik method you
can directly use the following simple function:
lrt - function (obj1, obj2) {
L0 - logLik(obj1)
L1 - logLik(obj2)
L01 - as.vector(- 2 * (L0
R-helpers:
I have a question regarding the crr function of the cmprsk package for
performing competing risks regression. Specifically, I was wondering
if the standard likelihood ratio test for a categorical covariate
applies. For example:
# Make up a fake
Hi,
I want to do a global likelihood ratio test for the proportional odds
logistic regression model and am unsure how to go about it. I am using
the polr() function in library(MASS).
1. Is the p-value from the likelihood ratio test obtained by
anova(fit1,fit2), where fit1 is the polr model with
On Sat, 5 Jan 2008, xinyi lin wrote:
Hi,
I want to do a global likelihood ratio test for the proportional odds
logistic regression model and am unsure how to go about it. I am using
the polr() function in library(MASS).
1. Is the p-value from the likelihood ratio test obtained by
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