This may be a silly question to ask, but, is it possible do do a  
MANOVA-style analysis with a generalized linear model?  I have a data  
set that I'm working with that, for each variable (time in this case,  
as it's a repeated measures MANOVA) is fit much better using glm  
rather than a traditional linear model - even after transforming the  
data so that the resulting (I'm log transforming the data for lm,  
whereas under glm the data is most appropriate for a model with a  
poisson error and an exponential link).

However, under glm, if I try and fit my matrix of response variable, I  
get the error
Error: (subscript) logical subscript too long

Is there a library or method of analysis that handles this type of  
problem?

Much obliged!

-Jarrett




----------------------------------------
Jarrett Byrnes
Population Biology Graduate Group, UC Davis
Bodega Marine Lab
707-875-1969
http://www-eve.ucdavis.edu/stachowicz/byrnes.shtml


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