Re: [R] grid: How to merge cells in grid.layout?

2012-09-23 Thread Bert Gunter
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb

Re: [R] Latitude Longitude to SPDF

2012-09-24 Thread Bert Gunter
You might wish to post on the R-sig-geo list instead if you are involved with spatial data. -- Bert On Mon, Sep 24, 2012 at 8:02 AM, Bhupendrasinh Thakre vickytha...@gmail.com wrote: Hi Team, Need your guidance in building SPDF objects from Latitude, Longitude Information available. I am

Re: [R] Mean calculation of groups

2012-09-25 Thread Bert Gunter
, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R

Re: [R] Plotting of regsubsets adjr2 values not correct

2012-09-25 Thread Bert Gunter
/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com

Re: [R] Recategorizing Nominal variable

2012-09-25 Thread Bert Gunter
-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] corrgram

2012-09-25 Thread Bert Gunter
. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list https

Re: [R] nlme function examples for dose-respone

2012-09-25 Thread Bert Gunter
__ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal

Re: [R] (core) designation on Task View

2012-09-25 Thread Bert Gunter
http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics

Re: [R] (core) designation on Task View

2012-09-25 Thread Bert Gunter
, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R

Re: [R] mean-aggregate – but use unique for factor variables

2012-09-25 Thread Bert Gunter
commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] Is there a way to source from a specific Git repository without hardcoding the location everywhere?

2012-09-27 Thread Bert Gunter
://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http

Re: [R] Problem with grid.rect

2012-09-27 Thread Bert Gunter
(Sorry, forgot to cc to the list) -- Bert On Thu, Sep 27, 2012 at 10:41 AM, Bert Gunter bgun...@gene.com wrote: Perrick: You have an a extra ) after yscale = so the pushViewport statement is ignored and the rest does what you ask it to. -- Bert On Thu, Sep 27, 2012 at 9:39 AM, Pierrick

Re: [R] problem with nls starting values

2012-09-27 Thread Bert Gunter
-03, -9.414477e-03) plot(slopes~quantiles) -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R

Re: [R] problem with nls starting values

2012-09-27 Thread Bert Gunter
-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb

Re: [R] problem with nls starting values

2012-09-27 Thread Bert Gunter
, Ben Bolker bbol...@gmail.com wrote: Bert Gunter gunter.berton at gene.com writes: On Thu, Sep 27, 2012 at 12:43 PM, Benedikt Gehr benedikt.gehr at ieu.uzh.ch wrote: now I feel very silly! I swear I was trying this for a long time and it didn't work. Now that I closed R and restarted

Re: [R] Lattice bwplot(): Conditioning on one factor

2012-09-28 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing

Re: [R] Lattice bwplot(): Conditioning on one factor

2012-09-28 Thread Bert Gunter
-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone

Re: [R] Simple Question

2012-09-28 Thread Bert Gunter
/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index

Re: [R] Merging multiple columns into one column

2012-09-28 Thread Bert Gunter
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] Unexpected behavior with weights in binomial glm()

2012-09-30 Thread Bert Gunter
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb

Re: [R] Strategy for building a robust rare event logistic model - Questions.

2012-09-30 Thread Bert Gunter
-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r

Re: [R] Retrieve hypergeometric results in large scale

2012-10-01 Thread Bert Gunter
mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374

Re: [R] calculating probability from the density function

2012-10-01 Thread Bert Gunter
http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb

Re: [R] Retrieve hypergeometric results in large scale

2012-10-01 Thread Bert Gunter
https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http

Re: [R] Transform pairwise observations into a table

2012-10-01 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list

Re: [R] lattice xyplot, get current level

2012-10-02 Thread Bert Gunter
-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] count data as independent variable in logistinc regression

2012-10-02 Thread Bert Gunter
, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R

Re: [R] R process must die - can I save history?

2012-10-02 Thread Bert Gunter
/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index

Re: [R] Difficulties in trying to do a mixed effects model using the lmer function

2012-10-03 Thread Bert Gunter
code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list https

Re: [R] How to convert array dim names to expressions for plotting?

2012-10-04 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list

Re: [R] Rainflow, range pair counting

2012-10-04 Thread Bert Gunter
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] help with making figures

2012-10-04 Thread Bert Gunter
commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] problem with convergence in mle2/optim function

2012-10-05 Thread Bert Gunter
-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone

Re: [R] avoid - in specific case

2012-10-05 Thread Bert Gunter
-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467

Re: [R] vector is not assigned correctly in for loop

2012-10-06 Thread Bert Gunter
commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] Robust regression for ordered data

2012-10-07 Thread Bert Gunter
-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org

Re: [R] Need some help reproducing a graph

2012-10-08 Thread Bert Gunter
Homework? We don't do homework here. Bert Sent from my iPhone -- please excuse typos. On Oct 8, 2012, at 4:20 PM, dLevy mans...@hotmail.com wrote: http://r.789695.n4.nabble.com/file/n4645492/graph.jpg I need to replicate this graph. It is a simple normal distribution-curve with mean 90

Re: [R] how to convert by lists in data.frames

2012-10-09 Thread Bert Gunter
deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert

Re: [R] synthetic distribution built upon set of discrete values

2012-10-09 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing

Re: [R] omega vs. alpha explanation

2012-10-10 Thread Bert Gunter
http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics

Re: [R] se's and CI's for fitted lines in multivariate regression analysis

2012-10-10 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list

Re: [R] replacing ugly for loops

2012-10-11 Thread Bert Gunter
-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info

Re: [R] Sorting a data frame by specifying a vector

2012-10-11 Thread Bert Gunter
code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list https

Re: [R] replacing ugly for loops

2012-10-11 Thread Bert Gunter
] 3 4 5 6 7 15 16 17 Cheers, Bert On Wed, Oct 10, 2012 at 10:59 PM, Bert Gunter bgun...@gene.com wrote: I am not sure you have expressed what you wanjt to do correctly. See inline: On Wed, Oct 10, 2012 at 9:10 PM, andrewH ahoer...@rprogress.org wrote: I have a couple of hundred American

Re: [R] Sorting a data frame by specifying a vector

2012-10-11 Thread Bert Gunter
Spring 0.1927715 #16 Spring 0.1927715 Any other thoughts? JR -Original Message- From: Bert Gunter [mailto:gunter.ber...@gene.com] Sent: Thursday, October 11, 2012 10:19 AM To: ROLL Josh F Cc: r-help@r-project.org Subject: Re: [R] Sorting a data frame by specifying a vector

Re: [R] Repeating a series of commands

2012-10-11 Thread Bert Gunter
. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech

Re: [R] replacing ugly for loops

2012-10-11 Thread Bert Gunter
and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] fit a threshold function with nls

2012-10-15 Thread Bert Gunter
-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb

Re: [R] Windows 7 R (32/64bit) running under cygwin: package not found

2012-10-16 Thread Bert Gunter
://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http

Re: [R] how to concatenate factor vectors?

2012-10-18 Thread Bert Gunter
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] summation coding

2012-10-18 Thread Bert Gunter
http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb

Re: [R] Matrix to data.frame with factors

2012-10-19 Thread Bert Gunter
. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical

Re: [R] fit a threshold function with nls

2012-10-20 Thread Bert Gunter
)? Also send me the code for simulating the data. I will show you how to fit such models using optimization tools. Best, Ravi From: Vito Muggeo [vito.mug...@unipa.it] Sent: Tuesday, October 16, 2012 9:55 AM To: Bert Gunter Cc: Véronique Boucher

Re: [R] What is behind class coercion of a factor into a character

2012-10-22 Thread Bert Gunter
list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website

Re: [R] How to use tapply with more than one variables grouped

2012-10-22 Thread Bert Gunter
/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http

Re: [R] Help with applying a function to all possible 2x2 submatrices

2012-10-22 Thread Bert Gunter
, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r

Re: [R] Olmstead-Tukey Diagram

2012-10-23 Thread Bert Gunter
-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb

Re: [R] Join data frame columns

2012-10-23 Thread Bert Gunter
://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http

Re: [R] How to use tapply with more than one variables grouped

2012-10-23 Thread Bert Gunter
. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter

Re: [R] frequency

2012-10-23 Thread Bert Gunter
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb

Re: [R] Summary of variables with NA, empty

2012-10-23 Thread Bert Gunter
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] Understanding lattice barchart() display

2012-10-23 Thread Bert Gunter
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] Results not dispalying in R console

2012-10-24 Thread Bert Gunter
/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index

Re: [R] multi-panel figure: overall title for each row

2012-10-24 Thread Bert Gunter
. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list https

Re: [R] for ( i in 23:0 ) { V - vector [ 1 : i ] }

2012-10-24 Thread Bert Gunter
, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] Expression in legend of plot

2012-10-25 Thread Bert Gunter
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb

Re: [R] Estimating credit card default probabilities.

2012-10-25 Thread Bert Gunter
mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374

Re: [R] system is computationally singular: reciprocal condition number

2012-10-25 Thread Bert Gunter
http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics

Re: [R] Hausman test in R

2012-10-28 Thread Bert Gunter
-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org

Re: [R] Which test should I use for comparing the change of two samples

2012-10-29 Thread Bert Gunter
]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech

Re: [R] Interaction

2012-10-29 Thread Bert Gunter
-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone

Re: [R] standard error for quantile

2012-10-30 Thread Bert Gunter
, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R

Re: [R] help - extract data using column names

2012-10-30 Thread Bert Gunter
-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact

Re: [R] peer-reviewed (or not) publications on R

2012-10-30 Thread Bert Gunter
/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index

Re: [R] help with for loop: new column giving count of observation for each SITEID

2012-10-30 Thread Bert Gunter
. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical

Re: [R] help with for loop: new column giving count of observation for each SITEID

2012-10-30 Thread Bert Gunter
-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] From summary function to formula

2012-10-31 Thread Bert Gunter
/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com

Re: [R] gauss fit with outlier removal

2012-10-31 Thread Bert Gunter
/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http

Re: [R] finding global variables in a function containing formulae

2012-11-01 Thread Bert Gunter
-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index

Re: [R] Name assignment in for loop

2012-11-01 Thread Bert Gunter
}} __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech

Re: [R] Loop over several Variables, add on question

2012-11-02 Thread Bert Gunter
. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter

Re: [R] Shapiro-Wilk normality test

2012-11-02 Thread Bert Gunter
https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http

Re: [R] For loop...

2012-11-04 Thread Bert Gunter
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb

Re: [R] what is the function naming convention?

2012-11-04 Thread Bert Gunter
, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert

Re: [R] R 2.15.2 is released

2012-11-04 Thread Bert Gunter
/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index

Re: [R] averaging a list of matrices element wise

2012-11-05 Thread Bert Gunter
-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact

Re: [R] averaging a list of matrices element wise

2012-11-05 Thread Bert Gunter
elapsed 5.090.535.65 At the very least the two are competitive, and in these sorts of data (large list of small matrices) Reduce(0 may be slightly faster. I leave it to those who are curious to check out other scenarios. Cheers, Bert On Mon, Nov 5, 2012 at 7:12 AM, Bert Gunter bgun

Re: [R] averaging a list of matrices element wise

2012-11-06 Thread Bert Gunter
- Van: Bert Gunter [mailto:gunter.ber...@gene.com] Verzonden: maandag 5 november 2012 16:13 Aan: D. Rizopoulos CC: ONKELINX, Thierry; r-help@r-project.org Onderwerp: Re: [R] averaging a list of matrices element wise Gents: Although it is difficult to say what may be faster, as it typically

Re: [R] pseudo R-squared with likfit (geoR)

2012-11-07 Thread Bert Gunter
]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical

Re: [R] pseudo R-squared with likfit (geoR)

2012-11-07 Thread Bert Gunter
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm

Re: [R] Aggregate data frame across columns

2012-11-07 Thread Bert Gunter
]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech

Re: [R] Executing SAS Codes in R

2012-11-07 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list

Re: [R] extract indep vars from formula

2012-11-07 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing

Re: [R] negative extents to matrix

2013-05-16 Thread Bert Gunter
/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com

Re: [R] Problems using lmer {lme4}

2013-05-17 Thread Bert Gunter
deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert

Re: [R] Extracting values from grid cells using for loops

2013-05-19 Thread Bert Gunter
, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm __ R-help@r-project.org mailing list

Re: [R] ANOVA Estimated effects may be unbalanced

2013-05-19 Thread Bert Gunter
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb

Re: [R] How many decimal places of information does R actually use in computation?

2013-05-20 Thread Bert Gunter
-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone

Re: [R] Lattice, ggplot, and pointsize

2013-05-21 Thread Bert Gunter
. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech

Re: [R] Balanced design throws design unbalanced, cannot proceed error

2013-05-22 Thread Bert Gunter
read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Bert Gunter Genentech Nonclinical Biostatistics Internal Contact Info: Phone: 467-7374 Website: http://pharmadevelopment.roche.com/index/pdb/pdb-functional

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