RE: [R] Clustering partition and memory

2003-02-09 Thread Vincent Stoliaroff
Thanks. Clara() is performing well. I had a dataset of 7500 rows and the clustering was produced very quickly From: "Adaikalavan Ramasamy" <[EMAIL PROTECTED]> To: "Vincent Stoliaroff" <[EMAIL PROTECTED]>,<[EMAIL PROTECTED]> Subject: RE: [R] Clustering partition and memory Date: Sun, 9 Feb 20

Re: [R] installation on FreeBSD

2003-02-09 Thread loren mccarter
I'm not sure what is causing it to dump core. I'm using FreeBSD 4.7 and I'm waiting for 5.1 before upgrading so I can't troubleshoot it on my end. Here are some things you may want to try: (1)~use /stand/sysinstall to add R as a binary package (R-1.5.1_1 is available this way), (2)~if you think it'

[R] calling sweave function from LaTex re directories, formatting

2003-02-09 Thread Sam McClatchie
System info: Mandrake 9.0 R Version 1.6.1 ESS 5.1.21 Emacs 21.2.1 --- Colleagues I have followed suggestions by David Whiting, Friedrich Leisch and Frank Harrell, but have a few more queries. 1. On formatting: I added the suggested sweave customization to my .emacs file ; Swea

RE: [R] to modify a vector

2003-02-09 Thread Henrik Bengtsson
Hi, if I understand you correctly, you would like to change the value of all elements with current value of 3 to 9. This is how you do it: a1 <- c(1,2,3,4,3,5) idx <- (a1 == 3) a1[idx] <- 9 or in one line a1[a1 == 3] <- 9 Look at 'idx' above. It is a logical vector of the same leng

Re: [R] nomogram

2003-02-09 Thread Frank E Harrell Jr
On Mon, 10 Feb 2003 00:53:50 +0100 [EMAIL PROTECTED] wrote: > somebody can help me to draw a nomogram > of the Cumulative Binomiale Distribution > or simple example of nomogram > [EMAIL PROTECTED] > > Pascal (France) > > [[alternate HTML version deleted]] > > _

Re: [R] Wireframe (lattice) questions

2003-02-09 Thread Deepayan Sarkar
On Sunday 09 February 2003 05:19 pm, Christopher Adolph wrote: > I have a few questions on formatting wireframe plots: > > 1. How can I remove (or at least "white-out") the border on the plot? > (I.e., the 2-d box around the whole plotting area, not the 3-d cube). I'm > willing to hack the code i

[R] nomogram

2003-02-09 Thread cpp
somebody can help me to draw a nomogram of the Cumulative Binomiale Distribution or simple example of nomogram [EMAIL PROTECTED] Pascal (France) [[alternate HTML version deleted]] __ [EMAIL PROTECTED] mailing list http://www.stat.math.ethz.ch/m

[R] Wireframe (lattice) questions

2003-02-09 Thread Christopher Adolph
I have a few questions on formatting wireframe plots: 1. How can I remove (or at least "white-out") the border on the plot? (I.e., the 2-d box around the whole plotting area, not the 3-d cube). I'm willing to hack the code if necessary. 2. Is it possible to suppress plotting of all sides of t

Re: [R] postgres/R access problems

2003-02-09 Thread Brendan Murray
On Mon, 2003-02-10 at 11:06, [EMAIL PROTECTED] wrote: > I was asking about which R *package* and version: R itself does not > interface to any DBMS, but there are several ways to interface to PgSQL > and they are *packages* like RPgSQL, which has different versions in > different repositories (alth

Re: [R] postgres/R access problems

2003-02-09 Thread ripley
I was asking about which R *package* and version: R itself does not interface to any DBMS, but there are several ways to interface to PgSQL and they are *packages* like RPgSQL, which has different versions in different repositories (although AFAIK none are current on CRAN). (There is also a dbi.som

Re: [R] label storage and conversions: DBMS and R

2003-02-09 Thread Frank E Harrell Jr
On Sun, 9 Feb 2003 16:29:51 EST [EMAIL PROTECTED] wrote: > Hi R users, > > I am new to using DBMS with R for large datasets. Thanks to all who responded > with useful suggestion to my earlier postings about using large datasets and > DBMS with R. I am writing to get some help about how to desi

Re: [R] installation on FreeBSD

2003-02-09 Thread Peng Zhang
Dear loren, Thank you for your reply! I did try to install directly from source code. However I got the following error information: ../../../../library/methods/libs/methods.so is unchanged dumping R code in package 'methods' Segmentation fault (core dumped) *** Error code 139 Stop in /usr/home/

Re: [R] postgres/R access problems

2003-02-09 Thread Brendan Murray
On Mon, 2003-02-10 at 10:01, Prof Brian D Ripley wrote: > On 10 Feb 2003, Brendan Murray wrote: > > > I have a problem that has exhausted my ingenuity and would like pointers > > to a solution, or at least where to debug. > > > > - I am using R and postgresql. > > And which R package are you usin

[R] label storage and conversions: DBMS and R

2003-02-09 Thread TyagiAnupam
Hi R users, I am new to using DBMS with R for large datasets. Thanks to all who responded with useful suggestion to my earlier postings about using large datasets and DBMS with R. I am writing to get some help about how to design good tables in DBMS to take full advantage of the wonderful buil

Re: [R] postgres/R access problems

2003-02-09 Thread Prof Brian D Ripley
On 10 Feb 2003, Brendan Murray wrote: > I have a problem that has exhausted my ingenuity and would like pointers > to a solution, or at least where to debug. > > - I am using R and postgresql. And which R package are you using, which version, from which repository? -- Brian D. Ripley,

Re: [R] installation on FreeBSD

2003-02-09 Thread loren mccarter
I've been using R on FreeBSD for several years now so I can tell you it works fine. However I have not yet upgraded to FreeBSD 5.0 so perhaps it has something to do with the new version. Here's something you may want to try: Rather than using the old version of R from the FreeBSD ports collection,

[R] postgres/R access problems

2003-02-09 Thread Brendan Murray
Hello I have a problem that has exhausted my ingenuity and would like pointers to a solution, or at least where to debug. - I am using R and postgresql. - I have databases on two different servers. - I have a few users, who use different client machines - whose R installations are identical (rsyn

[R] Help for to use tkbutton

2003-02-09 Thread Francisco do Nascimento Junior
Where I can to find a good help with examples? Tks, Francisco. ^^ Francisco JĂșnior, Computer Science - UFPE-Brazil "One life has more value that the world whole" ^^ __ [EMAIL PROTEC

Re: [R] Clustering partition and memory

2003-02-09 Thread kjetil brinchmann halvorsen
On 9 Feb 2003 at 11:33, Vincent Stoliaroff wrote: cluster have the function clara() "clustering large applications", written just to cluster large amounts of data. Did you try that? Kjetil Halvorsen > > > Dear R-help list members > > i would like to use R to produce clustering or partitionin

RE: [R] Clustering partition and memory

2003-02-09 Thread Adaikalavan Ramasamy
What distance metric are you using? See if clara() in cluster library etc is more appropriate. -Original Message- From: Vincent Stoliaroff [mailto:[EMAIL PROTECTED]] Sent: Sunday, February 09, 2003 7:33 PM To: [EMAIL PROTECTED] Subject: [R] Clustering partition and memory Dear R-help

[R] Clustering partition and memory

2003-02-09 Thread Vincent Stoliaroff
Dear R-help list members i would like to use R to produce clustering or partitioning of a dataset. I am trying to use the functions: - hierclust() of the package multiv -pam(), agnes() and fanny() of the package cluster But I cannot get any result because of lack of memory. Would you know any

RE: [R] to modify a matrix

2003-02-09 Thread Adaikalavan Ramasamy
May I suggest you learn the handy function called which(). yes.rows <- which(x[,1]==3)# Row that meets this condition x[ yes, 2] <- x[ yes.rows, 2] * 5 # Perform the desired change for the row that meets this condition. At 12:04 AM 2/9/2003 +0900, Mitsuo Igarashi wrote: >Hi All. > >I

Re: [R] install error

2003-02-09 Thread Sean O'Riordain
Good morning Yuhong! I've just done a rebuild of R-1.6.2 on my machine here using the following commands (from my history)... 48 mkdir tmpR 49 cd tmpR 50 tar xzvf ../R-1.6.2.tgz 51 pwd 52 cd R-1.6.2/ 53 ./configure --prefix=/home/sean/software/R/tmpR 54 make 55 n

Re: [R] is.finite() of a list

2003-02-09 Thread ripley
On Sun, 9 Feb 2003, stephen wisdom wrote: > > > ?is.finite > > `is.finite' and `is.infinite' return a vector of the same length > as `x', indicating which elements are finite or not. > > is.finite() of a list seems to return a vector of the length of the list, but with value FALSE if

Re: [R] to modify a matrix : Summary

2003-02-09 Thread Mitsuo Igarashi
I truly thank for evrybody to give me many very good answers and suggestions. I like to summarize the replies with their results when excuted on R and with my comments. My question is > x <- matrix(1:10.,5) > x [,1] [,2] [1,]16 [2,]27 [3,]38 [4,]49 [5,]5