Re: [R] Q: Best-Practice for Swing-GUI calling R-code on Windows?

2003-03-02 Thread ripley
On Mon, 3 Mar 2003, Till Baumgaertel wrote: > org.omegahat.R.Java.REvaluator e = new > org.omegahat.R.Java.REvaluator(); > > Object val = e.eval("objects()"); > > if(val != null) { > String[] objects = (String[])val; > for(int i = 0 ; i < objects.len

[R] $R_HOME

2003-03-02 Thread Bai Yan
Suppose the R source file is at: /disk/R-1.6.2/ and R is installed at: /disk/R/ Which valud is $R_HOME? 1. /disk/ 2. /disk/R-1.6.2 3. /disk/R/ I thought the answer is 3 but not sure. From the manual "R installation and Administration", it says 'Choose a place to install the R tree, let's call th

REmbeddedPostgres question Re: [R] How to change the default librarydirectory?

2003-03-02 Thread Bai Yan
Hi, I just figured out this problem by setting up the R_LIBS environment. But a new question came up when I tried to install the REmbeddedPostgres package. It seems this package must be installed in /usr/lib/R but cannot be install into a user-specified library directory. Anybody here had such exp

[R] samin and vmmin

2003-03-02 Thread Susan Shortreed
I am writing code in C and would like to call R's functions samin and vmmin (optimization routines: simulated annealing and BFGS) I do not understand how to create and pass in the function (as well as the extra arguments it needs) I am optimizing. I have read the R Extensions manual but it is sti

[R] using data() in an example

2003-03-02 Thread Christopher Adolph
Hi all, I'm trying to put together examples in an R package, and am having trouble reading data from the package's data directory. The data are in comma-separated variable files, so to read a file like gw.csv, I include in the data directory both bailey.csv and a file bailey.R which contains: b

[R] Use Rterm in rxvt for Cygwin?

2003-03-02 Thread Paul Y. Peng
Dear R users, Does anyone notice that Rterm.exe does not work well with rxvt.exe, an xterm emulator for Cygwin? It produces an error message window with the following message: This program has performed an illegal operation and will be shut down. If the problem persists, contact the p

[R] Q: Best-Practice for Swing-GUI calling R-code on Windows?

2003-03-02 Thread Till Baumgaertel
org.omegahat.R.Java.REvaluator e = new org.omegahat.R.Java.REvaluator(); Object val = e.eval("objects()"); if(val != null) { String[] objects = (String[])val; for(int i = 0 ; i < objects.length; i++) System.err.prin

[R] How to change the default library directory?

2003-03-02 Thread Bai Yan
I installed SJava package at $R_HOME/lib/R/library/ When I conduct library(SJava), I always need to explicitly specify the library path, how could I change the default library path? I have included the SJava path in the LD_LIBRARY_PATH variable as: %echo $LD_LIBRARY_PATH R_HOME/lib/R/library:R_H

[R] gss_0.8-2

2003-03-02 Thread Chong Gu
A new version of gss, version 0.8-2, is on CRAN now. Numerous new functionalities have been added since my last r-announce post. An ssanova1 suite has been added since version 0.7-4. It implements low-dimensional approximations of the smoothing spline ANOVA models of the ssanova suite. ssanova

Re: [R] error message from gls(), unstructured in lower triangle, identical diagonal, help.

2003-03-02 Thread P L
> It's just by chance that this happened: the > correlation you generated > was not strong enough, or was far from an > unstructured correlation and > the algorithm did not converge (and you obtained > this error message). > Generate another sample might solve the problem. > I think that you he

Re: [R] ESS+R not closing gracefully

2003-03-02 Thread John Fox
Dear Tony and Damon, I, too, have seen this problem (and other similar problems) occasionally. I don't really understand the source of the problem, but I think that it involves synchronization issues, and I find that inserting delays between operations seems to help. Take a look, for example, a

Re: [R] how to uninstall R

2003-03-02 Thread ripley
It is not actually necessary to install R: see the R-admin manual. It is a very bad idea to install to use the source tree. Just build in a directory != srcdir, as the R-admin manual explains. You have read _all_ the R-admin manual, haven't you? Just in case you haven't, please do as you are

Re: [R] how to uninstall R

2003-03-02 Thread Bai Yan
On Sun, 2 Mar 2003, Uwe Ligges wrote: > > > Bai Yan wrote: > > > > It cannot work. > > > > %make uninstall > > make: *** No rule to make target `uninstall'. Stop. > > Well, you did a make distclean before, hence you Makefile has been > deleted. > It's generally a bad idea to have identical sour

Re: [R] question on - build R as a shared library

2003-03-02 Thread Uwe Ligges
Bai Yan wrote: > > The thing is that even I didn't specify 'enable-shlib', I still get > libR.so but not libR.a, I must missed something here. > Please have a look at the logs below: > > > %cd /disk/hopper/projects/class/cse514/R-1.6.2/ > %make distcle

Re: [R] how to uninstall R

2003-03-02 Thread Uwe Ligges
Bai Yan wrote: > > It cannot work. > > %make uninstall > make: *** No rule to make target `uninstall'. Stop. Well, you did a make distclean before, hence you Makefile has been deleted. It's generally a bad idea to have identical source path and installation path, whcih appoears to be the case

Re: [R] how to uninstall R

2003-03-02 Thread Bai Yan
It cannot work. %make uninstall make: *** No rule to make target `uninstall'. Stop. Yan On Sun, 2 Mar 2003, Uwe Ligges wrote: > > > Bai Yan wrote: > > > > After I used 'make distclean', I still can access R input 'R' command. How > > could R be completely removed? must I delete all the direct

Re: [R] how to uninstall R

2003-03-02 Thread Uwe Ligges
Bai Yan wrote: > > After I used 'make distclean', I still can access R input 'R' command. How > could R be completely removed? must I delete all the directory? > > Thanks, > Yan make distclean cleans the sources from previous configures and makes, instead try: make uninstall Uwe Ligges __

[R] how to uninstall R

2003-03-02 Thread Bai Yan
After I used 'make distclean', I still can access R input 'R' command. How could R be completely removed? must I delete all the directory? Thanks, Yan __ [EMAIL PROTECTED] mailing list http://www.stat.math.ethz.ch/mailman/listinfo/r-help

Re: [R] question on - build R as a shared library

2003-03-02 Thread Bai Yan
The thing is that even I didn't specify 'enable-shlib', I still get libR.so but not libR.a, I must missed something here. Please have a look at the logs below: %cd /disk/hopper/projects/class/cse514/R-1.6.2/ %make distclean ... %./configure --prefix=/di

Re: [R] ESS+R not closing gracefully

2003-03-02 Thread A.J. Rossini
Damon Wischik <[EMAIL PROTECTED]> writes: > I am having trouble with ESS+R. I don't know if it is an ESS > problem or an R problem, so I'm posting to this mailing list in > the first instance. Actually, it might be an Emacs problem -- or an R problem. The fact that R/ESS works under windows is

[R] ESS+R not closing gracefully

2003-03-02 Thread Damon Wischik
I am having trouble with ESS+R. I don't know if it is an ESS problem or an R problem, so I'm posting to this mailing list in the first instance. I am using R 1.6.2, Windows XP (latest updates installed), XEmacs 21.4, and ESS 5.1.21. I have experienced the same problem under Windows 2000 and recen

Re[2]: [R] optim

2003-03-02 Thread Remigijus Lapinskas
Sunday, March 02, 2003, 9:48:26 PM, you wrote: MK> [EMAIL PROTECTED] wrote: >> You are not solving the same problem, which is more than a little `odd'. MK> Why? MK> >>> want to choose the three parameters so that MK> these three integrals are as close to, resp., 2300, 4600 and 5800 as MK> possi

Re: [R] model.frame.default problem in function definition

2003-03-02 Thread ripley
This works in R-devel, for which NEWS says o step(), add1.default() and drop1.default() now work somewhat better if called from a function. It's mainly a scoping problem, related to changes made way back in 1.2.x. However, it is also an bad example, as z is really excluded in the f

Re: [R] A quirk in `transform'?

2003-03-02 Thread Peter Dalgaard BSA
Steve Wisdom <[EMAIL PROTECTED]> writes: > A quirk in `transform'? .. > > transform(df,x=x) > Error in transform(df, x = x) : Object "x" not found Yes (or in argument matching). "x" names the object and thus cannot be used again as a tag. -- O__ Peter Dalgaard Blegdamsvej

[R] model.frame.default problem in function definition

2003-03-02 Thread Darryl Greig
Could someone point me in the right direction for the following issue: A function is defined as follows: tfun <- function(dat) { fmla <- as.formula("y~x+z") dat2 <- dat mdl <- lm(fmla,dat2) mdl <- step(mdl) } Then the fo

[R] A quirk in `transform'?

2003-03-02 Thread Steve Wisdom
A quirk in `transform'? > df <- data.frame(x=1:3, y=4:6, z=7:9); df x y z 1 1 4 7 2 2 5 8 3 3 6 9 > transform(df,z=z) x y z 1 1 4 7 2 2 5 8 3 3 6 9 > transform(df,y=y) x y z 1 1 4 7 2 2 5 8 3 3 6 9 > transform(df,x=x) Error in transform(df, x = x) : Object "x" not found > _

Re: [R] optim

2003-03-02 Thread M.Kondrin
[EMAIL PROTECTED] wrote: You are not solving the same problem, which is more than a little `odd'. Why? >>> want to choose the three parameters so that these three integrals are as close to, resp., 2300, 4600 and 5800 as possible. As I have three equations with three unknowns, I expect the exact

Re: [R] optim

2003-03-02 Thread M.Kondrin
Hello! Although I agree that the functions used are a little tricky to deal with, it seems to me to be an odd way to use optim(). Wouldn't it be better just use uniroot? What I have in mind is: THETA[2] may be easily excluded from the equations. So we are left with 2 functions and 2 unknowns (TH

[R] Dynamically changing point's symbol in grid.points...

2003-03-02 Thread M.Kondrin
...does not work. Do k<-grid.points(c(0.1,0.2,0.3),c(0.1,0.2,0.3),pch=3,vp=viewport()) (symbol - +). Try to change it grid.edit(k, pch=1) (symbol - open circle). Get filled squares. pch from 0 to 25 produces the same output. pch="x" - works OK. Device - x11(), gtk() (from GtkDevice). R -1.6.1