Re: [R] saving a character vector

2006-02-05 Thread Philippe Grosjean
If I understand the question correctly, both Jim Holtman's and John Fox's answers are correct solutions. However, they are not optimal ones (that was not the question -optimize my code, please-, but one can talk about it a little bit). - Jim proposes (I rework a little bit his code):

Re: [R] reading in a tricky computer program output

2006-02-05 Thread Berwin A Turlach
G'day Taka, TM == Taka Matzmoto [EMAIL PROTECTED] writes: TM and then assign the character vector to the numeric vector by TM names-first.10 TM first.10 = numeric.vector TM combined.one - cbind(names,first.10) TM container - diag(10) TM for (i in 1:(10*10)) I don't

[R] wireframe zlim option

2006-02-05 Thread Marius Hofert
Hello, I would like to plot a wireframe of a function which is defined on the unit square using the lattice library (for trellis-like plots). The plot contains z-values of about 100 (only in the neighborhood of zero) although most of the z-values are in the range of -let's say- 0 to 10. If I

Re: [R] reading in a tricky computer program output

2006-02-05 Thread Berwin A Turlach
BAT == Berwin A Turlach [EMAIL PROTECTED] writes: TM == Taka Matzmoto [EMAIL PROTECTED] writes: TM and then assign the character vector to the numeric vector by TM names-first.10 TM first.10 = numeric.vector TM combined.one - cbind(names,first.10) TM container - diag(10)

[R] 3-dimensional table

2006-02-05 Thread Jeffrey Stratford
Hi, Last week my class conducted an experiment by putting out clay caterpillars to look at the effects of urbanization, color, and location on caterpillar predation. There were two sites (urban, rural), three colors (green, yellow, red) and two locations at each site (edge, interior). The

Re: [R] rgl install problem on Solaris 10 X86

2006-02-05 Thread Dongseok Choi
Hi, Thank you very much for your prompt help. 1) I downloaded 'rgl' package from CRAN and its version is 0.65. This seems to be the lasted. 2) I added those two lines and now Color.cpp is compiled OK. However, I have a different error as following: CC -xtarget=generic64

Re: [R] reading in a tricky computer program output

2006-02-05 Thread Gabor Grothendieck
Its not clear to me what format you want to put the data in but this will read it into a list, one list element per lower triangular matrix. Modify to suit. DF - read.table(myfile.dat, fill = TRUE) id - cumsum(is.na(DF[,2])) result - by(DF, id, as.matrix) # if the input is in the second format

Re: [R] rgl install problem on Solaris 10 X86

2006-02-05 Thread Duncan Murdoch
On 2/5/2006 10:25 AM, Dongseok Choi wrote: Hi, Thank you very much for your prompt help. 1) I downloaded 'rgl' package from CRAN and its version is 0.65. This seems to be the lasted. That's the latest on CRAN, but not the latest available. See my message below. I have put Brian's

[R] Cluster Analysis

2006-02-05 Thread John Janmaat
Hello, I'm trying some cluster analysis, using the hclust command. I am looking for some help in selecting the 'best' number of clusters. Some software reports pseudo-F and pseudo-T^2 statistics, for each cluster merge. Is there any way to generate such statistics simply in R? Thanks,

Re: [R] Cluster Analysis

2006-02-05 Thread Romain Francois
Le 05.02.2006 17:50, John Janmaat a écrit : Hello, I'm trying some cluster analysis, using the hclust command. I am looking for some help in selecting the 'best' number of clusters. Some software reports pseudo-F and pseudo-T^2 statistics, for each cluster merge. Is there any way to

[R] R socket communication

2006-02-05 Thread pau carre
Hello, I tried to code a R socket server but I did not succeed. The problem is that once the R socket server is created, I call the readLines function and then R gets blocked. The client seems to work fine since I tested it with a PERL server. I tried many combination of params in the

Re: [R] R socket communication

2006-02-05 Thread Philippe Grosjean
See package svSocket in the SciViews bundle. It uses a socket server written in tcltk and it is not blocking the command line. Philippe Grosjean pau carre wrote: Hello, I tried to code a R socket server but I did not succeed. The problem is that once the R socket server is created, I call

Re: [R] R socket communication

2006-02-05 Thread pau carre
Hello, thank you for your help but I need to use the standard R packages as I am developing an academic project and I the use of external R packages is not allowed. Pau. 2006/2/5, Philippe Grosjean [EMAIL PROTECTED]: See package svSocket in the SciViews bundle. It uses a socket server written

[R] for each element in matrix...

2006-02-05 Thread Andrej Kastrin
Dead R useRs, I wrote function, which plot dotchart from given matrix, compute mean from diagonal elements and plot it with abline. In addition, if particular element of matrix is greater then mean value (i.e. mead.diagonal), it should be plot in red, otherwise in green color. graph -

Re: [R] srt --- slope text with function?

2006-02-05 Thread ivo welch
Dear R Wizards: To bore everyone to death, below is an improved and hopefully final version of my native.slope() function. (Thanks, Jim.) In case you are not asleep yet reading yet another post of mine, may I ask the experts some programming questions? [I just saw yesterday's threat---I

Re: [R] glm-logistic on discrete-time methods with individual and aggregated data

2006-02-05 Thread Spencer Graves
You've found a region of infinite extent over which the likelihood function is for all practical purposes flat. This means that the maximum likelihood estimates (MLEs) are not unique. To see this consider the following properties of your datiINDa: with(datiINDa, table(statusINDa,

Re: [R] srt --- slope text with function? (list user defined functions)

2006-02-05 Thread Pierre Kleiber
I'll respond to one of your multitude of queries below. Suggest that you confine your postings to a single issue so that the subject heading is more meaningful. Cheers, Pierre ivo welch offered the following remark on 02/05/06 11:28... [...] * is there a way to print all my user defined

Re: [R] srt --- slope text with function?

2006-02-05 Thread Duncan Murdoch
On 2/5/2006 4:28 PM, ivo welch wrote: Dear R Wizards: To bore everyone to death, below is an improved and hopefully final version of my native.slope() function. (Thanks, Jim.) In case you are not asleep yet reading yet another post of mine, may I ask the experts some programming questions?

Re: [R] Glossay of available R functions

2006-02-05 Thread Patricia J. Hawkins
PBR == Prof Brian Ripley [EMAIL PROTECTED] writes: commenting that subset was new to him, though he did say list of functions in R. I'd searched through everything _else_ in the help system looking for such a glossary; I hadn't thought to look under *Packages*, as those are, of course,

Re: [R] readline detection problems

2006-02-05 Thread Patricia J. Hawkins
BO == Benjamin Otto [EMAIL PROTECTED] writes: BO Dear community, BO I'm trying to install R-2.2.1 on an IRIX 6.2 (Unix System V Release 4) BO system without root access. Unfortunately readline is not installed in BO default, so I installed it locally in my home directory, more precisely in: BO

Re: [R] Glossay of available R functions

2006-02-05 Thread Patricia J. Hawkins
MHHS == Martin Henry H Stevens [EMAIL PROTECTED] writes: MHHS Start R help, and select the Search Engine Keywords link. This MHHS will take you to a page where keywords (including functions) are MHHS arranged by topic. It includes base and recommended MHHS packages. Also not that on the CRAN

Re: [R] reading in a tricky computer program output

2006-02-05 Thread jim holtman
Is this what you want? You can use 'scan' to read in and 'fill' out data in a row. x - scan('/temp/document1.txt', what=list(0, 0, 0, 0, 0), fill=T, multi.line=F) Read 15 records x - do.call('rbind', x) # create a matrix x [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9]

Re: [R] readline detection problems

2006-02-05 Thread Alexandre Santos Aguiar
without root access. Benjamin, In a normal Unix environment non root users can't install software. This is one of the reasons why Unix systems are more secure. When you compile readline by ./configure; make; make install some system files must be created: headers must be installed to

[R] Fixing AR coefficients in VAR model

2006-02-05 Thread Daniel Medina
Dear Colleague, I would like to set a few AR coefficients (not order) to zero in the multivariate AR function (mAr.est; mAr library); however, the manual for this function does not provide this information. I would appreciate any suggestions along this line. Thankfully yours, Daniel C Medina

[R] drawing outside a plot region

2006-02-05 Thread ivo welch
Dear R wizards: First, thank you for all the responses to my earlier queries. Will keep me busy tomorrow morning. Can I add one graphics question to my ever changing set of bothering questions, please? plot( c(0,1), c(0,1) ); crop.to.plot.off(); # what I want; does not exist text( -0.3, 0.1,

[R] decomposed.ts class and method

2006-02-05 Thread Erin Hodgess
Dear R People: In the function decompose, the object has the class of decomposed.ts. (from package stats) I would like to see the class definition and the method for the plotting. However, when I use isClass(decomposed.ts) I get FALSE. When I check getMethods(plot) there is no method for

Re: [R] decomposed.ts class and method

2006-02-05 Thread Gabor Grothendieck
Try: getAnywhere(plot.decomposed.ts) getAnywhere(print.decomposed.ts) # not found; its using print.default Also note this gives an S3 generic's methods: methods(plot) On 2/5/06, Erin Hodgess [EMAIL PROTECTED] wrote: Dear R People: In the function decompose, the object has the class of

Re: [R] drawing outside a plot region

2006-02-05 Thread Gabor Grothendieck
Check xpd= in ?par On 2/5/06, ivo welch [EMAIL PROTECTED] wrote: Dear R wizards: First, thank you for all the responses to my earlier queries. Will keep me busy tomorrow morning. Can I add one graphics question to my ever changing set of bothering questions, please? plot( c(0,1), c(0,1)

Re: [R] wireframe zlim option

2006-02-05 Thread Deepayan Sarkar
On 2/5/06, Marius Hofert [EMAIL PROTECTED] wrote: Hello, I would like to plot a wireframe of a function which is defined on the unit square using the lattice library (for trellis-like plots). The plot contains z-values of about 100 (only in the neighborhood of zero) although most of the

[R] Help In Sequence of Dates

2006-02-05 Thread Sumanta Basak
Dear R-users, First of all, I'm sorry if this is a simple question. I want a daily date series which will be a sequence. E.g. starting from 07/03/1962 to 12/03/1997. Thanks in advance. I want to paste this date series with the data series I have. Thanks Regards, Sumanta Basak.

Re: [R] Help In Sequence of Dates

2006-02-05 Thread Gabor Grothendieck
Try ?seq.Date On 2/6/06, Sumanta Basak [EMAIL PROTECTED] wrote: Dear R-users, First of all, I'm sorry if this is a simple question. I want a daily date series which will be a sequence. E.g. starting from 07/03/1962 to 12/03/1997. Thanks in advance. I want to paste this date series with

Re: [R] srt --- slope text with function? (list user defined functions)

2006-02-05 Thread Prof Brian Ripley
On Sun, 5 Feb 2006, Pierre Kleiber wrote: I'll respond to one of your multitude of queries below. Suggest that you confine your postings to a single issue so that the subject heading is more meaningful. Cheers, Pierre ivo welch offered the following remark on 02/05/06 11:28... [...] *

Re: [R] drawing outside a plot region

2006-02-05 Thread Prof Brian Ripley
On Sun, 5 Feb 2006, ivo welch wrote: Dear R wizards: First, thank you for all the responses to my earlier queries. Will keep me busy tomorrow morning. Can I add one graphics question to my ever changing set of bothering questions, please? plot( c(0,1), c(0,1) ); crop.to.plot.off(); #

Re: [R] decomposed.ts class and method

2006-02-05 Thread Prof Brian Ripley
This is an S3 class, not an S4 class. (Package stats does not use S4 classes: only package stats4 in the R tarball does.) On Sun, 5 Feb 2006, Erin Hodgess wrote: Dear R People: In the function decompose, the object has the class of decomposed.ts. (from package stats) I would like to see

Re: [R] srt --- slope text with function?

2006-02-05 Thread Prof Brian Ripley
On Sun, 5 Feb 2006, Duncan Murdoch wrote: On 2/5/2006 4:28 PM, ivo welch wrote: Dear R Wizards: To bore everyone to death, below is an improved and hopefully final version of my native.slope() function. (Thanks, Jim.) In case you are not asleep yet reading yet another post of mine, may I

[R] Embedding datasets, was Re: srt --- slope text with function?

2006-02-05 Thread Peter Dalgaard
Duncan Murdoch [EMAIL PROTECTED] writes: On 2/5/2006 4:28 PM, ivo welch wrote: * has it now become possible to embed sample data sets in R code? (I asked this a while back, but there were nly kludges, no standard pretty solutions.) I don't understand the question. dump() produces R