[R] LimmaGUI and Design Matrix

2007-08-14 Thread tee` suesean
Hi all, I'm working on microarray and currently analyzing the microrarray data using limmaGUI. Loop design has been applied in this experiment. This is a 2X2 factorial experiment where there are control and treatment at 2 different time points, week 6 and 9. The experimental design is almo

Re: [R] LimmaGUI

2007-04-24 Thread J . delasHeras
Quoting [EMAIL PROTECTED]: > Hi everyone, > > I have a question about limmaGUI.I've just started to use the program > for microarray analysis.My problem is after loading data into Limma > (with GAl file and RNA targets file),I'm not able to create an M box > plot and everytime I'm trying to do tha

[R] LimmaGUI

2007-04-23 Thread solie . alizadeh
Hi everyone, I have a question about limmaGUI.I've just started to use the program for microarray analysis.My problem is after loading data into Limma (with GAl file and RNA targets file),I'm not able to create an M box plot and everytime I'm trying to do that, some error appear: Error in .f

Re: [R] limmaGUI

2007-04-23 Thread J . delasHeras
Quoting [EMAIL PROTECTED]: > Dear all, > > I have a question about limmaGUI that is usually run in R environment. > My problem is loading data into the programm. I have 6 gpr files that > apparently are not compatible with limma. Everytime I'm trying to load > the data (including a RNA targets fil

[R] limmaGUI

2007-04-20 Thread solie . alizadeh
Dear all, I have a question about limmaGUI that is usually run in R environment. My problem is loading data into the programm. I have 6 gpr files that apparently are not compatible with limma. Everytime I'm trying to load the data (including a RNA targets file, an error appears:Error reading