answers,-
Stefan
Original Message
Subject: [R] update packages with R on Vista: error
From: Stefan Grosse <[EMAIL PROTECTED]>
To: r-help@stat.math.ethz.ch
Date: 07.06.2007 12:00
> Dear R-list,
>
> I have encountered the following error message trying to up
possible inconvenience caused by my frustration
spiced up possibly with my inabilities.
Stefan
Original Message
Subject: Re:[R] update packages with R on Vista: error
From: Stefan Grosse <[EMAIL PROTECTED]>
To: R. Villegas <[EMAIL PROTECTED]>
Date: 08.06.2007 11:07
can update my
latex packages without any problems even though they are in the Program
File directory (and also on-the-fly installation does work) ...
Stefan
Original Message
Subject: Re:[R] update packages with R on Vista: error
From: R. Villegas <[EMAIL PROTECTED]>
To:
t. Even
> though e.g. library(nlme), ?nlme shows that the latest version is
> installed.
>
> I would guess there is some problem with the library path variable in
> the update program...
>
> Stefan
>
>
> Original Message
> Subject: Re:[R] update pack
al Message
Subject: Re:[R] update packages with R on Vista: error
From: Prof Brian Ripley <[EMAIL PROTECTED]>
To: Stefan Grosse <[EMAIL PROTECTED]>
Date: 07.06.2007 13:01
> See the rw-FAQ, which describes this in detail.
>
> Almost certainly you are trying to update the package &
See the rw-FAQ, which describes this in detail.
Almost certainly you are trying to update the package 'cluster' which is
in the main library. But as you used the GUI, we can't see that.
On Thu, 7 Jun 2007, Stefan Grosse wrote:
> Dear R-list,
>
> I have encountered the following error message t
Dear R-list,
I have encountered the following error message trying to update R packages:
> update.packages(ask='graphics')
Warning in install.packages(update[instlib == l, "Package"], l,
contriburl = contriburl, :
'lib' is not writable
Error in install.packages(update[instlib == l, "Pac
The (*windows only*) xlsReadWrite package has been updated and the new
version is available on CRAN.
xlsReadWrite natively reads and writes Excel files (v97 - 2003).
o Changes from v1.1.1 to v1.3.3 (versions between never really published)
- ROWNAMES-support also for matrices (not only for da
also, i have a typo on the fifth to last line of what is pasted below (
should be fxdatac not fxdatab ) but it doesn't matter. what i said about
the results still holds. thanks.
From: Leeds, Mark (IED)
Sent: Friday, October 27, 2006 9:56 PM
To: r-help@stat.math
as jim pointed out ( i think we were figuring this out simultaneously.
thanks a lot jim ), it looks it does have something to do with the
fact that it's a zoo object because below i consider two cases.
in the first case, fxdatab is a zoo object and i get the length of temp
to be 1.
in the second
Kim Milferstedt uiuc.edu> writes:
>
> Hello,
>
> I have a time series of data as a data.frame. Occasionally there is
> one or more days missing (e.g. data available for days 2, 3, 4, 8, 9,
> 10 --> missing days between 4 and 8). The experimental time
> information can be found in the 2nd col
try using a 'while':
i <- 1
while (i < nrow(data) - 1)
{
diff.time<- round(data[i+1,2], 0) - round(data[i,2], 0)-1
old.row <- nrow(data)
if (diff.time > 0)
{
fill<- c(data[i,1],
(round(data[i,2], 0)+1), rep(0,classnumber))
Hello,
I have a time series of data as a data.frame. Occasionally there is
one or more days missing (e.g. data available for days 2, 3, 4, 8, 9,
10 --> missing days between 4 and 8). The experimental time
information can be found in the 2nd column of "data". I would like to
have a continuous t
I start the html help with
> help.start(browser="dillo")
and all subsequent requests with ? open in dillo
Rainer
Dylan Beaudette wrote:
> hi,
>
> how exactly do you get R to open the page in dillo ... ?
>
> thanks!
>
> On Thursday 21 September 2006 23:54, Rainer M Krug wrote:
>> Hi
>>
>>
Hi
I asked about if there is any way of opening URLs from the help browser
in the same window of the same dillo browser - here is the answer.
Just to reiterate: dillo is for me the perfect browser for the help of R
when you use ?...
Rainer
Original Message
Subject: Re: [Dill
On Thu, 31 Aug 2006, Nguyen Dinh Nguyen wrote:
> Dear R helpers,
> I would like to update R 2.2.1 to the latest version,
> How can I do it without loosing all my installed packages?
What OS?
If Windows, this is discussed in the rw-FAQ, and the advice there is
useful on all OSes.
--
Brian D.
Dear R helpers,
I would like to update R 2.2.1 to the latest version,
How can I do it without loosing all my installed packages?
Many thanks
Nguyen
__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the
Thanks for the answers so far.
I have to go through this with my system administrator.
The system is slackware linux.
> For Unix-alikes, it all depends how the update was done, but normal
> package update mechanisms (such as RPM) will not wipe out previously
> installed R packages: nor will 'mak
Without knowing your OS this is hard to answer (and is the wrong list for
the ESS question).
For Windows users, the packages part is covered in the rw-FAQ.
For Unix-alikes, it all depends how the update was done, but normal
package update mechanisms (such as RPM) will not wipe out previously
i
ESS finds R by one of two mechanisms.
If R is in your PATH, then ESS will find it.
Or, if you have explicitly set the emacs variable
inferior-R-program-name, in .emacs, site-start.el, or ess-site.el,
then ESS will find R.
My guess is that you have explicitly set inferior-R-program-name
to your p
Hi there,
it seems that if I update R, it doesn't find previously installed packages
anymore and is also not found by ESS.
Actually the update has been done by our system administrator who assumed
that there would be no problems with these things (I don't have root
access to this system) and wi
Here is a copy of the relevant line in my /etc/apt/sources.list
deb http://cran.R-project.org/bin/linux/debian sarge/
Hope this helps,
Clint
Florence Débarre wrote:
> I've installed Ubuntu 5.10 Breezy on my Mac. When using MacOSX, I used to
> work with R 2.2.1, but now, with Ubuntu, I can't down
On Mer 1 mars 2006 9:55, Andris Jankevics a écrit :
> In my opinion line in /etc/apt/sources.lst shoud be similar like this:
> deb http://cran.r-project.org/bin/linux/debian/stable ./
Doesn't work either...
W: Impossible de localiser la liste des paquets sources
http://cran.R-project.org ./ Pack
In my opinion line in /etc/apt/sources.lst shoud be similar like this:
deb http://cran.r-project.org/bin/linux/debian/stable ./
On Trešdiena, 1. Marts 2006 10:13, Florence Débarre wrote:
> On Mer 1 mars 2006 8:58, Prof Brian Ripley a écrit :
> > Maybe you need to spell cran.R-project.org in Engli
On Mer 1 mars 2006 8:58, Prof Brian Ripley a écrit :
> Maybe you need to spell cran.R-project.org in English, with a 'c'?
Thanks, but... still doesn't work...
W: Impossible de localiser la liste des paquets sources
http://cran.R-project.org stable/ Packages
(/var/lib/apt/lists/cran.R-project.org_
Maybe you need to spell cran.R-project.org in English, with a 'c'?
On Wed, 1 Mar 2006, Florence Débarre wrote:
I've installed Ubuntu 5.10 Breezy on my Mac. When using MacOSX, I used to
work with R 2.2.1, but now, with Ubuntu, I can't download it with
synaptic. I can only download R 2.1.1-1, and
I've installed Ubuntu 5.10 Breezy on my Mac. When using MacOSX, I used to
work with R 2.2.1, but now, with Ubuntu, I can't download it with
synaptic. I can only download R 2.1.1-1, and I really need 2.2.1.
I've tried to edit the sources.list file, typing
deb http://cran.R-projet.org/bin/linux/deb
erv.mcmaster.ca/jfox
> -Original Message-
> From: [EMAIL PROTECTED]
> [mailto:[EMAIL PROTECTED] On Behalf Of Kenneth Cabrera
> Sent: Tuesday, February 14, 2006 7:05 PM
> To: John Fox
> Cc: r-help@stat.math.ethz.ch
> Subject: Re: [R] Update problems of Rcmdr?
> Importance:
stat.math.ethz.ch
Subject: [R] Update problems of Rcmdr?
Importance: High
Hi R users:
I got this messages when I try to use the Rcmdr library,
after I make an update with update.packages() command.
I am using R221 in windows environment.
> library(Rcmdr)
Loading required package: tcltk
Loadi
cmaster.ca/jfox
> -Original Message-
> From: [EMAIL PROTECTED]
> [mailto:[EMAIL PROTECTED] On Behalf Of Kenneth Cabrera
> Sent: Monday, February 13, 2006 7:54 PM
> To: r-help@stat.math.ethz.ch
> Subject: [R] Update problems of Rcmdr?
> Importance: High
>
Hi R users:
I got this messages when I try to use the Rcmdr library, after
I make an update with update.packages() command.
I am using R221 in windows environment.
> library(Rcmdr)
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: car
Error in parse(file
Dear R users, I have the following code:
require(nlme)
myfunc <- function(data, n, m, maxIter = 3){
working <- groupedData(formula = y~x|id, data=data)
val <- NULL
r <- 0
while(r < maxIter){
new.data <- data.frame(x=rnorm(n),y=rnorm(n),id=rep(
Actually I tried it and a version of nonadd which
corresponds to my prior solution can be written
without using external packages in only 2
extra lines:
nonadd <- function(formula.) {
f <- lm(formula.)
e <- new.env(parent = environment(formula.))
e$v <- f$fitted.values^2
Here is another solution in addition to the ones already
provided. This creates a proto object which is an
environment that contains v and whose parent is
the formula's environment. update will look in the proto
object and find v. It won't find x and y but will next
look to the parent of the pr
R was changed 1.2.0 to look for variables in the environment of formula
(see ?model.frame and ?formula). So either use data() or put v there as in
nonadd <- function(formula)
{
f <- lm(formula)
v <- f$fitted.values^2
assign("v", v, envir=environment(formula))
g <- update(f
I'm having problems with environments and update() that
I expect have a simple explanation. To illustrate, suppose
I wanted to make a very primitive Tukey one-degree-of-
freedom for nonadditivity test and naively wrote:
nonadd <- function(formula){
f <- lm(formula)
v <- f$fitted
I think using sessionInfo() instead of version is a good idea.
On 29 Dec 2005, [EMAIL PROTECTED] wrote:
> [Note that sessionInfo() currently does not report all the
> information that 'version' does (it omits at least "Status" and "svn
> rev"). R-core members are aware of this -- whether or not t
Some changes have been made to the posting guide, based on suggestions
from various R-help contributors over the past year.
The most significant change is the recommendation to use 'sessionInfo()'
rather than 'version' when asking questions about unexpected behavior
or bugs. This change was
On Thu, 15 Dec 2005, Christian Hoffmann wrote:
> Hi list,
>
> I have not been successful in finding out from the available
> documentation how under Unix/Solaris to update a packages which I
> downloaded from the net as the original *.tar.gz and stored in a local
> file, say
What does 'update' me
Hi list,
I have not been successful in finding out from the available
documentation how under Unix/Solaris to update a packages which I
downloaded from the net as the original *.tar.gz and stored in a local
file, say
(1) home/woodstock/hoffmacw/R/Sources/pack.tar.gz
A lot of installed librari
Thanks you.
Now, I can install and update some packages from local repos.
I put all R packages (zip files, using W2K)
in h:/myFolder/myRepository,
library(tools)
write_PACKAGES("h:/myFolder/myRepository")
options(repos=c(LocalR="file:///h:/myFolder/myRepository"))
getOption("repos")
install.packag
On Wed, 16 Nov 2005, P Ehlers wrote:
> This should work:
>
> update.packages(ask = "graphics", repos = NULL,
> contriburl = "file:///g:/myFolder/myRepository"))
Only if the so-called repository contains (only) binary builds under R
2.2.x of packages for Windows.
It would be better to set up
This should work:
update.packages(ask = "graphics", repos = NULL,
contriburl = "file:///g:/myFolder/myRepository"))
-peter
Muhammad Subianto wrote:
> I try to update R packages via my local repository.
> I put all R packages in g:/myFolder/myRepository, I do like
>
>
>>library(tools)
>>wr
I try to update R packages via my local repository.
I put all R packages in g:/myFolder/myRepository, I do like
> library(tools)
> write_PACKAGES("g:/myFolder/myRepository")
> options(repos=c(LocalR="file://g:/myFolder/myRepository"))
> getOption("repos")
LocalR
"file://
Prof Brian Ripley wrote:
> On Sat, 1 Oct 2005, Ramón Casero Cañas wrote:
>
>> I'd like to update MASS from version 7.2-11 to version 7-2.19. I am
>> running R 2.0.1 on ubuntu, that installs MASS with the package r-cran-vr.
>
>
> First, MASS is part of VR, so it is VR you update.
Thanks Prof Rip
Ramón Casero Cañas wrote:
> I'd like to update MASS from version 7.2-11 to version 7-2.19. I am
> running R 2.0.1 on ubuntu, that installs MASS with the package r-cran-vr.
>
My installed version of MASS, 7-2.20, has version requirement R>= 2.1.0,
so you will need to update R first.
Kjetil
> I h
On Sat, 1 Oct 2005, Ramón Casero Cañas wrote:
I'd like to update MASS from version 7.2-11 to version 7-2.19. I am
running R 2.0.1 on ubuntu, that installs MASS with the package r-cran-vr.
First, MASS is part of VR, so it is VR you update.
Second, please do *READ THE HELP PAGE*. The first arg
I'd like to update MASS from version 7.2-11 to version 7-2.19. I am
running R 2.0.1 on ubuntu, that installs MASS with the package r-cran-vr.
I have tried doing update.packages(), and I get a list of packages that
I could update, but none is called MASS.
I have tried the following too, right aft
Hi,
yesterday, I switched to newest version of R-2.1.1 by using YAst to
install necessary SuSE-rpms from a separate local directory. So far ,
so good.
Afterwards I tried to find out if there are any updates for add-on
packages, and of cause there were some of them requiring a
refreshment.
Fo
Dear List,
I am new to Linux and I just installed Fedora Core 3 (workstation installation)
on my PC--software came from a book called Red Hate Linux Fedora 3 Unleashed.
Installing R was relatively easy.
I ran into a problem, however. After typing "Update.Packages()" I am able to
download them
Hi all,
GUIs for R is an active field of research, as illustrated by contributions
in this topic at the recent UseR! conference. I have just updated
http://www.r-project.org/GUI to reflect changes and new projects like JGR,
wxPython, Rho and SciViews-R.
Best,
Philippe Grosjean
..
Which version of R? This is supposedly fixed in 1.9.0 beta, so please try
that.
On Fri, 26 Mar 2004, Simon.Bond wrote:
> I've noticed that the update() function does not seem to work correctly
> when offset(..) terms are there:
>
> update(modelwithoffset, .~.-afixedeffect)
>
> drops the offs
I've noticed that the update() function does not seem to work correctly
when offset(..) terms are there:
update(modelwithoffset, .~.-afixedeffect)
drops the offset term.
I'm using this with a negbin model, but I think it goes wrong with the
update.formula() function.
update.formula
function (o
Hello R-users,
first thanks to all who responded my questions regarding the installation
of the Rcmdr and tcltk packages. The problem is with the tclk package on
which Rcmdr depends.
Following Prof Ripley's advice I re-installed Tcl and Tk, compiling from
sources and making sure the "--enable-64
Ghislaine Guigon wrote:
How do you update R on Windows
See Section "2.6 What's the best way to upgrade?" in the R for Windows FAQ.
> and how do you install your own package
with windows interface ?
You can only install binary packages "with the Windows interface", i.e.
using install.packa
Hi!
I make a complete Full Install with the newest setup.exe. I install also all packages
again.
About own packages see the Win FAQ on cran for a start.
Eryk
*** REPLY SEPARATOR ***
On 12/29/2003 at 3:13 PM Ghislaine Guigon wrote:
>How do you update R on Windows and how do you
How do you update R on Windows and how do you install your own package
with windows interface ?
regards,
Ghislaine GUIGON
Biostatisticienne
Plate-forme 2 Puces a ADN
INSTITUT PASTEUR
25-28 rue du Dr ROUX
75724 Paris cedex 15
FRANCE
tel: (33) (0)1 40 61 86 51
fa
I would like to announce that my DataLoad utility which can be found at:
http://www.vsn-intl.com/genstat/downloads/datald.htm
has been updated to support R data.frames. DataLoad reads a
large variety of data formats (listed on the web page) and
can convert these to ASCII or XDR data.frames. Only t
Hello,
I used "fink" to install R but its version
is the 1.7.0 and I want to install and update
bioconductor packages with getBioC.R ; this
script requires R1.7.1; Is there a way to just update
it on my
Mac osx?
Thanks in advance
Line
__
[EMAIL PR
I have explained that on R-help earlier today (and when VR_7.1-4 was
announced). Please look back a few hours in the R-help postings.
On Tue, 3 Jun 2003, Dirk Enzmann wrote:
> The update of VR by downloading VR_7.1-6.zip and using install.packages
> (from local zip files) fails with the followi
Hi Dirk,
dse and VR are bundles or packages. There is a bug in rw1070 in the way
it installs bundles.
Download the zip file directly and unzip it to the library directory in
wherever R is installed on your system.
This has been discussed recently (this morning) on the list. Search the
archi
On Tue, 3 Jun 2003, Dirk Enzmann wrote:
> The update of VR by downloading VR_7.1-6.zip and using install.packages
> (from local zip files) fails with the following error message:
>
> Error in file(file, "r") : unable to open connection
> In addition: Warning message:
> cannot open file `VR/DESCRIP
The update of VR by downloading VR_7.1-6.zip and using install.packages
(from local zip files) fails with the following error message:
Error in file(file, "r") : unable to open connection
In addition: Warning message:
cannot open file `VR/DESCRIPTION'
Other packages can be installed without probl
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