Hi list members,
I am having a problem installing vignettes for my asremlPlus package
(https://github.com/briencj/asremlPlus - see VIgnettes branch) and have run
into a brick wall in my efforts to solve it. So any help would be greatly
appreciated.
The basic problem is that the R.rsp package cannot be found by
loadVignetteBuilder when checking or building the package. Here are the details.
I am running R 3.5.1 under Windows 10.
I have compiled the Rmd sources to pdf files and I need to incorporate the pdfs
without rebuilding them. The reasons are that they rely on having a package
that is not available from a public R repo, namely asreml, and the R code take
too much time to run on the CRAN servers.
To deal with this I have tried to use the package R.rsp. Following the
instructions, for example for WheatVignette.pdf, I have included the
WheatVignette.pdf.asis with contents
%\VignetteIndexEntry{Wheat data: a spatial analysis example}
%\VignetteEngine{R.rsp::asis}
%\VignetteAuthor{Chris Brien}
%\VignetteKeyword{asremlPlus}
I have the following lines in the DESCRIPTION file:
Suggests: testthat, lattice, emmeans, lmerTest, pbkrtest, R.rsp
Enhances: asreml
VignetteBuilder: R.rsp
When I run the following devtools::check call on the package
devtools::check("asremlPlus", manual=TRUE, check_dir="D:/Analyses/R",
document=FALSE,
args="--as-cran")
I get the following error message
- saving partial Rd database (7.6s)
Error in loadVignetteBuilder(pkgdir, TRUE) :
vignette builder 'R.rsp' not found
Execution halted
Error in run(bin, args = real_cmdargs, stdout_line_callback =
real_callback(stdout), :
System command error
To check the availability of R.rsp I did the following:
> .libPaths();find.package("R.rsp")
[1] "D:/Analyses/R library" "D:/Analyses/R oldpkg"
[3] "C:/Program Files/StatSoft/R/R-3.5.1/library"
[1] "D:/Analyses/R library/R.rsp"
I also note that in my HOME directory I have an .Renviron file with the
following line:
R_LIBS_USER="D:\\Analyses\\R library"
Cheers,
Chris
Chris Brien | Adjunct Associate Professor in Statistics
-----
School of Information Technology & Mathematical Sciences
University of South Australia
GPO Box 2471
ADELAIDE 5001 South Australia
Phone: +61 8 8302 5535 Fax: +61 8 8302 5785
Email: chris.br...@unisa.edu.au
WEB page: <http://people.unisa.edu.au/Chris.Brien>
CRICOS No 00121B
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