Re: [R-pkg-devel] Trouble with dependencies on phyloseq and microViz

Sharon, I have upgraded Bioc on the R-oldrel build machines and that seems to have taken care of the problem as far as I can tell: https://cran.r-project.org/web/checks/check_results_HybridMicrobiomes.html If you have reports like that, it's a better idea to ask us first and always supply the n

Re: [R-pkg-devel] Trouble with dependencies on phyloseq and microViz

Ivan, sorry if it wasn't clear, but this thread was about strong dependencies -- Sharon noted that phyloseq must remain strong dependency and asked how to deal with that (see all the parts you cut from this thread). Now that I finally have the package name I can check the details - apparently t

Re: [R-pkg-devel] Trouble with dependencies on phyloseq and microViz

On Tue, 7 May 2024 10:07:59 +1200 Simon Urbanek wrote: > That doesn't work - additional repositories are not allowed on CRAN > other than in very exceptional cases, because it means the package > cannot be installed by users making it somewhat pointless. I suppose that with(tools::CRAN_package_d

Re: [R-pkg-devel] Trouble with dependencies on phyloseq and microViz

> On 5/05/2024, at 4:32 AM, Ivan Krylov via R-package-devel > wrote: > > В Sat, 4 May 2024 15:53:25 + > Sharon Bewick пишет: > >> I have a dependency on phyloseq, which is available through GitHub >> but not on the CRAN site. I have a similar problem with microViz, >> however I’ve manag

Re: [R-pkg-devel] Trouble with dependencies on phyloseq and microViz

В Sat, 4 May 2024 15:53:25 + Sharon Bewick пишет: > I have a dependency on phyloseq, which is available through GitHub > but not on the CRAN site. I have a similar problem with microViz, > however I’ve managed to make it suggested, rather than required. > There is no way to get around the phy

Re: [R-pkg-devel] Trouble with dependencies on phyloseq and microViz

On 04/05/2024 11:53 a.m., Sharon Bewick wrote: I’m having trouble with: r-oldrel-macos-arm64 and r-oldrel-macos-x86_64 flagging an er

[R-pkg-devel] Trouble with dependencies on phyloseq and microViz

I’m having trouble with: r-oldrel-macos-arm64 and r-oldrel-macos-x86_64 flagging an error because I have a dependency on phyloseq, whic