Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages

2017-02-16 Thread J C Nash
As a way to organize discussion for the session AND for the hopefully derivative development, I have set up a Github project https://github.com/nashjc/Rnavpkg In particular, I've started a small wiki therein, and especially have built a page "Ideas and people" where I have tried to summari

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-11 Thread Dirk Eddelbuettel
On 11 February 2017 at 16:41, Ben Bolker wrote: | I don't have a problem with this, but there are a few challenges. | | - continuity: there used to be an R wiki, but it eventually disappeared | (http://wiki.r-project.org now redirects to the main www.r-project.org page) Quite right. | - act

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-11 Thread Ben Bolker
I don't have a problem with this, but there are a few challenges. - continuity: there used to be an R wiki, but it eventually disappeared (http://wiki.r-project.org now redirects to the main www.r-project.org page) - actual contributions: I never got much feedback or contributions to http://g

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-11 Thread Zhian Kamvar
Hello, Jumping in here because those of us in the population genetics community have semi-recently tried to tackle some of these issues of giving users a clear sense of how R packages can work together in an analysis [0]. We created a website [1] that hosts vignettes openly contributed and cura

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-11 Thread J C Nash
Certainly Google can be useful, but it can also be infuriatingly time-wasting when one needs to sort out related tools that do slightly different things. Then good, up-to-date task views are important, and wrappers such as I and some others are trying to develop can be a way to ease the chore of

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-11 Thread J C Nash
Thanks for this. Besides stirring the pot by suggesting this suggestion, my own approach has been to try to do this with optimr/optimrx for "optimization" (actually function minimization with possibly bounds). Hans Werner Borchers has been charging ahead with a global optimization wrapper gloptim

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-10 Thread Jonathon Love
hi, first up let me apologise for breaking the thread. i subscribed to this list after the initial email went out. i'm not completely sure if the original post was to prompt a discussion here, but now there's a discussion, i'm jumping in! i'm a psychologist, and one of the challenges is the

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-10 Thread Marc Schwartz
Hi All, A few points: 1. With respect to the CRAN Task Views, they are arguably buried a bit in the menus and that may contribute to low traffic. There is no direct link from the R Home page, albeit, there is a link on the main CRAN page, which is not prominent. I wonder if it might be reasona

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-10 Thread Jim Lemon
This discussion started me thinking about searching for a function or package, as many questions on the R help list indicate the that poster couldn't find (or hasn't searched for) what they want. I don't think I have ever used task views. If I haven't got a clue where to look for something, I use G

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-10 Thread Ben Bolker
I definitely read the task views and advise others to do so. I don't know how representative my little corner of the world is, though. I have an embryonic task view on mixed models at https://github.com/bbolker/mixedmodels-misc/blob/master/MixedModels.ctv but the perfect is the enemy of the g

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-10 Thread J C Nash
We'd be more than happy to have you contribute directly. The goal is not just an information session, but to get some movement to ways to make the package collection(s) easier to use effectively. Note to selves: "effectively" is important -- we could make things easy by only recommending a few p

Re: [R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-02-10 Thread Michael Dewey
Dear all That seems an interesting session. I am the maintainer of one of the CRAN Task Views (MetaAnalysis) and will attend unless I am successful in the draw for Wimbledon tickets. Just in case I strike lucky one question I would have raised from the floor if I were there would have been "

[R-pkg-devel] UseR! Session: Navigating the jungle of R packages.

2017-01-16 Thread ProfJCNash
Navigating the Jungle of R Packages The R ecosystem has many packages in various collections, especially CRAN, Bioconductor, and GitHub. While this richness of choice speaks to the popularity and importance of R, the large number of contributed packages makes it difficult for users to find appropr