[R-sig-eco] Regression with few observations per factor level

2014-10-21 Thread V. Coudrain
> With such a small data set, why not simulate some data sets with > reasonable > effect sizes and see how an analysis performs? Krzysztof Dear Krzysztof, It is good idea. Would you know some R functions thatis are well suited for this kind of simulations _

Re: [R-sig-eco] predict NMS scores for new samples

2014-10-21 Thread Jonathan Coop
Thanks to all for the useful suggestions -- I just wanted to report back on my experience using the code that Dave Roberts refers to below, on his web page. It worked beautifully. I imagine that the utility of this approach would depend on the compositional overlap of the new samples with t

Re: [R-sig-eco] Logistic regression with 2 categorical predictors

2014-10-21 Thread Andrew Halford
Hi Thierry, The multiple comparisons ran just fine but there was a ridiculous amount of interaction combinations all of which were non-significant even though there was a highly significant interaction term. I decided to remove test as a variable to simplify the analysis and run separate single ex

Re: [R-sig-eco] Logistic regression with 2 categorical predictors

2014-10-21 Thread ONKELINX, Thierry
Hi Andrew, Please keep the mailing list in cc. The estimates in mc are the differences of the parameter estimates (betas) between both levels. E.g. 5.LR -1.LR = -1.168 or 5.LR = 1.LR - 1.168 summary(mc) should give you the significance of those differences. That should work. If it doesn't, ple

Re: [R-sig-eco] Regression with few observations per factor level

2014-10-21 Thread Krzysztof Sakrejda
With such a small data set, why not simulate some data sets with reasonable effect sizes and see how an analysis performs? Krzysztof On Mon, Oct 20, 2014 at 11:53 AM, V. Coudrain wrote: > Thank you for this helpful thought. So if I get it correctly it is hopeless > to try testing an interaction