Re: [R-sig-eco] RDA

Hello! That is very helpful and seems to work! Thank you!! I did not realize we could use raw data in capscale, is this true only because it is conditioning variables? At any rate it recapitulates our analysis using partial mantel in 2 species with 2 different results (one significant, the

Re: [R-sig-eco] RDA

El 26/11/2015 a las 16:27, Richards, Christina escribió: Hello! That is very helpful and seems to work! Thank you!! I did not realize we could use raw data in capscale, We could and we should! Currently, it is the only way to achieve it. is this true only because it is conditioning

Re: [R-sig-eco] RDA

> On 26 Nov 2015, at 20:05 pm, Marcelino de la Cruz > wrote: > > El 26/11/2015 a las 16:27, Richards, Christina escribió: >> Hello! >> >> That is very helpful and seems to work! Thank you!! >> >> I did not realize we could use raw data in capscale, > We could and

Re: [R-sig-eco] RDA

> On 26 Nov 2015, at 17:27 pm, Richards, Christina wrote: > > Hello! > > That is very helpful and seems to work! Thank you!! > > I did not realize we could use raw data in capscale, is this true only > because it is conditioning variables? At any rate it recapitulates our >

Re: [R-sig-eco] RDA

Thank you! that is exactly what we need. Christina Richards, Ph.D. University of South Florida Department of Integrative Biology 4202 East Fowler Avenue SCA 127 NES 107 (shipping) Tampa, FL 33620 (813)974-5090 (813)974-3263 FAX http://www.ecologicalepigenetics.com Twitter: @EcolEpig Facebook:

Re: [R-sig-eco] RDA

Hi Dr. Oksanen! Its very gracious of you to respond. On another important note, this is the citation suggested for the vegan package: Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, O'Hara RB, Simpson GL, Solymos P, Stevens MHH, Wagner H. (2015) vegan: Community Ecology Package. R

Re: [R-sig-eco] RDA

Yes, that is the appropriate citation for the software/implementation (and in the case of capscale() the method, I think; there are other variants of the idea around). `adonis()` is based on the permutational MANOVA (PERMANOVA) references to the papers that introduced this method are in `?adonis`,

[R-sig-eco] Morisita horn similarity index

 Hello I am trying to analyse diet overlap (level of similarity) between two species. I have diet composition in %. I have tried to find the best tool, and thought Morisita horn will do, but I cant find the right package for. Is this the best tool? Thank you, Moses [[alternative HTML