Eda,
How many permutations do you use? Have you tried setting the RNG seed via
set.seed() ? Also, if you have borderline p-values that change from run to
run it might indicate not so strong discrimination by the given clustering
of sites.
Cheers,
Peter
--
Péter Sólymos
780-492-8534 | soly...@
Why do I get inconsistent p-values for indicator values of species when
I run IndVal (in the labsdv package) on exactly the same dataset? I have
tested this with a small dataset (40 samples and 55 species) and a
larger dataset (334 samples and 545 species) and on different numbers of
clusters rangi
