al Message-
From: Tom Callaway [mailto:tcall...@redhat.com]
Sent: Friday, February 05, 2016 9:14 AM
To: Patrick, Larry B [CSSM] ;
'r-sig-fedora@r-project.org'
Subject: Re: [R-sig-Fedora] rstan warning messages
On 02/05/2016 09:58 AM, Patrick, Larry B [CSSM] wrote:
> Did the follo
On 02/05/2016 09:58 AM, Patrick, Larry B [CSSM] wrote:
> Did the following on my RHEL6 server:
> [root@ping ~]# export
> PKG_CONFIG_PATH=$PKG_CONFIG_PATH:/usr/lib64/pkgconfig/
> [root@ping ~]# /usr/bin/curl-config --libs
> -L/usr/lib64 -lcurl
I'm glad this worked, but you should no
ary 03, 2016 9:02 AM
> To: Patrick, Larry B [CSSM] ;
> 'r-sig-fedora@r-project.org'
> Subject: Re: [R-sig-Fedora] rstan warning messages
>
> On 02/03/2016 09:52 AM, Tom Callaway wrote:
>
>> Are you trying to build R and components for i686 rather than x86_64?
>
On 02/03/2016 09:52 AM, Tom Callaway wrote:
> Are you trying to build R and components for i686 rather than x86_64?
Never mind. Your logs make it clear that you're building for x86_64.
Can you share the output of:
pkg-config --list-all |grep libcurl
curl-config --libs
rpm -V libcurl-devel libcu
[CSSM] ;
'r-sig-fedora@r-project.org'
Subject: Re: [R-sig-Fedora] rstan warning messages
On 02/03/2016 09:52 AM, Tom Callaway wrote:
> Are you trying to build R and components for i686 rather than x86_64?
Never mind. Your logs make it clear that you're building for x86_64
On 02/03/2016 09:33 AM, Patrick, Larry B [CSSM] wrote:
> I didn't have any libgfortran files in /usr/lib so I did that soft link.
> Maybe something didn't fully install or configure. I have inherited this
> machine from another admin and it is not a fresh installation.
So, here's oddity number o
[CSSM] ;
'r-sig-fedora@r-project.org'
Subject: Re: [R-sig-Fedora] rstan warning messages
On 02/01/2016 03:45 PM, Patrick, Larry B [CSSM] wrote:
> Got past my libgfortran issue
> ln -s /usr/lib64/libgfortran.so.3 /usr/lib/libgfortran.so
Maybe to /usr/lib64/libgfortran.so ?
On 02/01/2016 03:45 PM, Patrick, Larry B [CSSM] wrote:
> Got past my libgfortran issue
> ln -s /usr/lib64/libgfortran.so.3 /usr/lib/libgfortran.so
Maybe to /usr/lib64/libgfortran.so ? You _should not_ need to do that
though. I didn't need to.
> Now if I could get RCurl and rstan installed.
[CSSM] ;
'r-sig-fedora@r-project.org'
Subject: Re: [R-sig-Fedora] rstan warning messages
On 01/28/2016 09:07 AM, Patrick, Larry B [CSSM] wrote:
> Looks to have libgfortran installed.
> yum list installed | grep libgfortran
> libgfortran.x86_64
On 01/28/2016 09:07 AM, Patrick, Larry B [CSSM] wrote:
> Looks to have libgfortran installed.
> yum list installed | grep libgfortran
> libgfortran.x86_644.4.7-16.el6
> @rhel-x86_64-server-6
> What else could I check?
>
> Installed libcurl-devel and libidn-de
DLLpath = DLLpath, ...) :
unable to load shared object '/usr/lib64/R/library/RCurl/libs/RCurl.so':
/usr/lib64/R/library/RCurl/libs/RCurl.so: undefined symbol:
curl_multi_remove_handle
Error: loading failed
Execution halted
ERROR: loading failed
* rem
On 01/27/2016 01:55 PM, Patrick, Larry B [CSSM] wrote:
> Confirmed that gcc-gfortran is installed
> Package gcc-gfortran-4.4.7-16.el6.x86_64 already installed and latest
> version
> What could I check next?
Hm. Do you have libgfortran installed?
~tom
==
Red Hat
___
Message-
From: Tom Callaway [mailto:tcall...@redhat.com]
Sent: Wednesday, January 27, 2016 12:32 PM
To: Patrick, Larry B [CSSM] ;
'r-sig-fedora@r-project.org'
Subject: Re: [R-sig-Fedora] rstan warning messages
On 01/27/2016 01:12 PM, Patrick, Larry B [CSSM] wrote:
> RHEL 6
On 01/27/2016 01:12 PM, Patrick, Larry B [CSSM] wrote:
> RHEL 6 installed
> R version 3.2.3 from EPEL installed
>
> Start R and use the following command, but got warnings!
>
> install.packages("rstan", dependencies = TRUE, repos =
> "http://cran.r-project.org/";)
> ...
> g++ -m64 -shared -L/usr
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