Re: [R-sig-Geo] spGLM

2017-08-24 Thread Andrew Finley
g list R-sig-Geo@r-project.org https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Dsig-2Dgeo&d=DwICAg&c=nE__W8dFE-shTxStwXtp0A&r=vOgWsEpXC-0Xwo-gVRww3A&m=PJ3MQSOol3LkkKQUUYhaakIn9sHbYI1BvcPIdqRqgdI&s=99t4yTictDFtDmoddyYrTfGsS4HVtiR38GYMKohfFxM&e=

Re: [R-sig-Geo] Spatially autocorrelated random effects in logistic regression.

2013-05-15 Thread Andrew Finley
Hi Hugh, Check out spGLM in the spBayes package. This should do what you need. Please let me know if you have any questions. -Andy Quoting Hugh Sturrock : Hi all, I am trying to model binomial data (infection status) of people living in households. I have run a logistic regression with a

Re: [R-sig-Geo] Spbayes package-spGLM function-Error in spGLM( , c++ error: dpotrf failed

2013-02-09 Thread Andrew Finley
Hi Roosbeh, It's generally good to direct package specific error questions to the package maintainers. That's me for spBayes. Do you have duplicate coordinates (that's a common issue when this error occurs). Otherwise you might have an issue with phi's prior. If it's not one of these, then pleas

Re: [R-sig-Geo] spatial regression for binary/dichotomous depend variable

2013-02-06 Thread Andrew Finley
Hi Tanja, Also, check out the spGLM function in the spBayes package as well as functions in the geoRglm package. -Andy Quoting Juan Tomas Sayago Gomez : there is also in the package McSpatial the possibility to run spatial logit and probit models. But you should check the literature in the

Re: [R-sig-Geo] Doubts about GLM

2013-01-05 Thread Andrew Finley
Hi Suzana, You can try the spGLM function in the spBayes package or similar functions in the geoRglm package which provide spatial random effects to accommodate residual spatial dependence. -Andy On Jan 5, 2013, at 15:34, Suzana Stutz wrote: > Hello dear list members. > > First I want to wish

Re: [R-sig-Geo] Question about space-time analysis routines

2012-11-05 Thread Andrew Finley
Hi, The new package spTimer might be another option. -Andy On Nov 5, 2012, at 5:56, Virgilio Gómez-Rubio wrote: > Hi, > >> I am curious if the list can point me to some other libraries in R, besides >> INLA, that are capable of using the spacetime data directly in a regression > > INLA is a go

Re: [R-sig-Geo] spatial models for Multinomial limited dependent variable

2012-04-21 Thread Andrew Finley
Hi Roosbeh, I don't know of any. However, you can use a series of logistic regression models that include spatial random effects, e.g., via spGLM function in the spBayes package. This approach is detailed in: Finley, A.O., S. Banerjee, and R.E. McRoberts. (2009) Hierarchical spatial models for

Re: [R-sig-Geo] kriging and cokriging with multiple covariate

2011-02-08 Thread Andrew Finley
Hi Toni, Check out the spMvLM function in the spBayes package (or spMvGLM depending on your outcome variable), there are also some illustrative slides and examples toward the bottom of this page http://blue.for.msu.edu/JBC_10/SC . Let me know if you have any questions- Andy Quoting TM :