[R-sig-Geo] Cluster identification using space-time permutations

2010-09-01 Thread Linda Pickle
In response to: Date: Mon, 30 Aug 2010 12:35:57 -0600 From: Jesse Whittington To: r-sig-geo@stat.math.ethz.ch Subject: [R-sig-Geo] Cluster identification using space-time permutations Message-ID: Content-Type: text/plain We've been using the SatScan space

Re: [R-sig-Geo] Cluster identification using space-time permutations

2010-08-31 Thread Jesse Whittington
Hi Virgilio, I tried your DCluster package earlier with the aid of Roger's book Applied Spatial Data Analysis with R. I'd still like to try your code for spatio-temporal clustering. It's probably OK if the algorithm is not fully tuned as I expect to get false positives. Thanks for your help, Je

Re: [R-sig-Geo] Cluster identification using space-time permutations

2010-08-30 Thread Virgilio Gómez-Rubio
Dear Jesse, You can look at the functions in the DCluster package for the (purely) spatial scan statistic. You could start from there. I have also some other code for spatio-temporal clustering that I have not yet released (and I believe that the permutation algorithm may not be tuned) but I will

[R-sig-Geo] Cluster identification using space-time permutations

2010-08-30 Thread Jesse Whittington
We've been using the SatScan space-time permutation scan statistic to identify potential predation sites (ie clusters) from wolf GPS data. Are there functions that I could use in R to run this cluster analysis? Here's the reference: Kulldorff et al. 2005 A Space–Time Permutation Scan Statistic fo