[R-sig-Geo] Memory issue in R gstat: Windows vs Linux (Ubuntu)

2009-12-07 Thread Zia Ahmed
If someone facing problem to analyze large data set in gstat in Windows due to memory issue, they can try in Ubuntu using "R-gedit". It is very easy to install Ubuntu in a Windows machine (as a dual booting system- not as a guest OS!). After installing r with all necessary packages user

Re: [R-sig-Geo] memory issue on R with Linux 64

2009-01-29 Thread Alexander.Herr
: Robert Hijmans [mailto:r.hijm...@gmail.com] Sent: Thursday, January 29, 2009 7:58 PM To: Herr, Alexander Herr - Herry (CSE, Gungahlin) Cc: r-sig-geo@stat.math.ethz.ch Subject: Re: [R-sig-Geo] memory issue on R with Linux 64 Herry, This is how you can do it in package{raster}. (revision 209; a build

Re: [R-sig-Geo] memory issue on R with Linux 64

2009-01-29 Thread Alexander.Herr
besma [mailto:edzer.pebe...@uni-muenster.de] Sent: Thursday, January 29, 2009 6:01 PM To: Herr, Alexander Herr - Herry (CSE, Gungahlin) Cc: r-sig-geo@stat.math.ethz.ch Subject: Re: [R-sig-Geo] memory issue on R with Linux 64 Well, this doesn't come as a surprise; if it did for you then you didn't read th

Re: [R-sig-Geo] memory issue on R with Linux 64

2009-01-29 Thread Roger Bivand
On Thu, 29 Jan 2009, Robert Hijmans wrote: Herry, This is how you can do it in package{raster}. (revision 209; a build should be available within 24 hours). Following Edzer's example: require(raster) library(maptools) # read a SpatialPolygonsDataFrame nc <- readShapePoly(system.file("shapes/

Re: [R-sig-Geo] memory issue on R with Linux 64

2009-01-29 Thread Robert Hijmans
Herry, This is how you can do it in package{raster}. (revision 209; a build should be available within 24 hours). Following Edzer's example: require(raster) library(maptools) # read a SpatialPolygonsDataFrame nc <- readShapePoly(system.file("shapes/sids.shp", package="maptools")[1], proj4

Re: [R-sig-Geo] memory issue on R with Linux 64

2009-01-28 Thread Roger Bivand
On Thu, 29 Jan 2009, alexander.h...@csiro.au wrote: Hi List, I get an error using readGDAL{rgdal}: cannot allocate vector of size 3.1 Gb This is a tile of your 73K by 80K raster, right? One possibility is to use smaller tiles, another to get more memory (as Edzer wrote), a third to use lo

Re: [R-sig-Geo] memory issue on R with Linux 64

2009-01-28 Thread Edzer Pebesma
Well, this doesn't come as a surprise; if it did for you then you didn't read the list archives well. R has been designed for analysing statistical data, which usually doesn't outnumber billions of observations, and not for analysis/processing of large grids/imagery. rgdal has infrastructure

[R-sig-Geo] memory issue on R with Linux 64

2009-01-28 Thread Alexander.Herr
Hi List, I get an error using readGDAL{rgdal}: cannot allocate vector of size 3.1 Gb I am using Linux 64bit (opensuse 11) with 4 gig swap and 4 gig Ram and R 2.8.0. The load monitor shows that most of Ram is used up and then when Swap use starts increasing, R returns the error. Is there anyt

Re: [R-sig-Geo] Memory issue

2008-11-04 Thread Roger Bivand
On Mon, 3 Nov 2008, Mikael Carlsson wrote: Hi,   First, thanks for all help so far...but I still have some problems. Here is the code: cumark <- read.table("k:/test/helamarkcu.txt", header=T, sep = ";") One copy of 3*40K*8 = 1MB memory.limit(size = 1897)    attach(cumark) vew <- as.vecto

Re: [R-sig-Geo] Memory issue

2008-11-04 Thread ONKELINX, Thierry
reasonable answer can be extracted from a given body of data. ~ John Tukey Van: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] Namens Mikael Carlsson Verzonden: maandag 3 november 2008 23:54 Aan: r-sig-geo@stat.math.ethz.ch Onderwerp: [R-sig-Geo] Memory issue Hi

[R-sig-Geo] Memory issue

2008-11-03 Thread Mikael Carlsson
Hi, First, thanks for all help so far...but I still have some problems.Here is the code:cumark <- read.table("k:/test/helamarkcu.txt", header=T, sep = ";")memory.limit(size = 1897)    attach(cumark)vew <- as.vector(ew)vns <- as.vector(ns)vcu <- as.vector(cu)fcumark <- data.frame(vew, vns, vcu)coord