Recently I came across a similar issue, but I had a far greater number of
repeated tests, 595 actually. If i used 10.000 permutations to access
significance, I noticed that I could never reject the null hypothesis. That is
because for 10.000 permutations, the minimum p value is 1e-04 and the
bo
Dear Ted, dear Fabio,
thank you so much for your suggestions. I found that people applied bonferroni
corrections in p-values in Pagel’s lambda, as shown in this paper:
http://www.pnas.org/content/106/43/18097.abstract
In my case, I decide to use p.adjust (x,method=“holm”,n=length(x)) to correct
