Re: [R-sig-phylo] PICs: Why force linear regressions through the origin?

2009-05-08 Thread Gernot Huber
perimental Research on Evolution http://nere.bio.uci.edu/ (A University of California Multicampus Research Project) Original message Date: Fri, 8 May 2009 09:09:04 -0700 From: Joe Felsenstein Subject: Re: [R-sig-phylo] PICs: Why force linear regressions through the origin

Re: [R-sig-phylo] PICs: Why force linear regressions through the origin?

2009-05-08 Thread tgarland
perimental Research on Evolution http://nere.bio.uci.edu/ (A University of California Multicampus Research Project) Original message Date: Fri, 8 May 2009 09:09:04 -0700 From: Joe Felsenstein Subject: Re: [R-sig-phylo] PICs: Why force linear regressions through

Re: [R-sig-phylo] PICs: Why force linear regressions through the origin?

2009-05-08 Thread Joe Felsenstein
Gernot Huber asked -- > 1. Why do you have to force a linear regression through the origin > when using phylogenetically independent contrasts (PICs)? Because their expectations are zero. A contrast could be either X1 - X2 or X2 - X1, for one thing. The expectations of X1 and X2 are identica

[R-sig-phylo] PICs: Why force linear regressions through the origin?

2009-05-08 Thread Gernot Huber
Hi, I haven't been able to find answers to the following questions: 1. Why do you have to force a linear regression through the origin when using phylogenetically independent contrasts (PICs)? 2. If you suspect an inverse linear relationship, would you transform one axis so you could still