Re: [R-sig-phylo] on evolutionary models

2013-01-24 Thread pasraia
Hi Marguerite, Ted, Paolo, all Thanks for the replies, Marguerite, models' fit was evaluated via AIC weights. I was interested in the phylogenetic signal exactly for descriptive purposes, and was wondering if it does make sense using BM as a reference when other models perform better. This is why

Re: [R-sig-phylo] on evolutionary models

2013-01-24 Thread Marguerite Butler
Dear Pas, I am wondering what the general aim of your study is? I agree with Ted, that you should be careful about your assumptions and the tools you are using. Ted's point that K is a descriptive statistic is an important one. K describes the expected divergence among tip traits assuming a m

[R-sig-phylo] on evolutionary models

2013-01-24 Thread Paolo Piras
Hi pas, Besides the other arguments, I think that one should test for phylogenetic signal AFTER trasforming the tree according to the best mode of evolution IF it is not brownian. Maybe someone else can add some more on this. best paolo Da: r-sig-phylo-