Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts

2010-06-22 Thread Greg Landrum
Hi James, On Mon, Jun 21, 2010 at 5:54 PM, James Davidson wrote: > Thanks Greg - this is great!  I must confess, I was eager to try this out > asap - but have not built rdkit before.  I did start having a go over the > weekend on my home PC (Windows MCE2005) but ran into a couple of unexpected

Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts

2010-06-21 Thread James Davidson
.land...@gmail.com] Sent: 18 June 2010 06:08 To: rdkit-discuss@lists.sourceforge.net Cc: James Davidson Subject: Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts Dear all, A followup/update on a request from a couple weeks ago: On Fri, Jun 4, 2010 at 6:13 AM, Greg Landrum wrote:

Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts

2010-06-17 Thread Greg Landrum
Dear all, A followup/update on a request from a couple weeks ago: On Fri, Jun 4, 2010 at 6:13 AM, Greg Landrum wrote: > On Thu, Jun 3, 2010 at 7:51 PM, James Davidson > wrote: >> >> (1)  I see that the reaction objects can be created from MDL Reaction >> Files/Blocks - is there a way to do the

Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts

2010-06-04 Thread James Davidson
mes -Original Message- From: Greg Landrum [mailto:greg.land...@gmail.com] Sent: Fri 04/06/2010 05:13 To: James Davidson Cc: rdkit-discuss@lists.sourceforge.net Subject: Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts Dear James, On Thu, Jun 3, 2010 at 7:51 PM, J

Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts

2010-06-04 Thread Greg Landrum
On Fri, Jun 4, 2010 at 9:31 AM, James Davidson wrote: > Thanks for the help, Greg - my reaction SMARTS are now behaving themselves! Excellent. I'm glad to hear it. > I must confess, I had not actually realised that the documentation from > install (ie the 'Book') was different to the 'Getting St

Re: [Rdkit-discuss] A couple of questions regarding ReactionFromSmarts

2010-06-03 Thread Greg Landrum
Dear James, On Thu, Jun 3, 2010 at 7:51 PM, James Davidson wrote: > > First of all, I'd like to start by saying how much I've been enjoying > exploring the functionality of RDKit - great job, Greg! Thanks! > I have a couple of questions regarding > 'rdkit.Chem.AllChem.ReactionFromSmarts': > > (

[Rdkit-discuss] A couple of questions regarding ReactionFromSmarts

2010-06-03 Thread James Davidson
Hi, First of all, I'd like to start by saying how much I've been enjoying exploring the functionality of RDKit - great job, Greg! I have a couple of questions regarding 'rdkit.Chem.AllChem.ReactionFromSmarts': (1) I see that the reaction objects can be created from MDL Reaction Files/Blocks -