Re: [Rdkit-discuss] Depicting reactions to the same quality as molecules

2017-05-24 Thread Greg Landrum
Hi Dave, Thanks for volunteering, but I have already started working on this based on on some code that Nadine did a while ago. It's probably more efficient for me to continue on that -greg On Wed, May 24, 2017 at 4:38 PM, David Cosgrove wrote: > Hi Greg, > I'll

Re: [Rdkit-discuss] Depicting reactions to the same quality as molecules

2017-05-24 Thread David Cosgrove
Hi Greg, I'll see about implementing this. I'll liaise with Ed. Cheers, Dave On Sat, May 20, 2017 at 7:00 AM, Greg Landrum wrote: > Hi Ed, > > This is a weak spot; we haven't yet added decent reaction depiction. > > The best that's currently available is to use the old

Re: [Rdkit-discuss] Depicting reactions to the same quality as molecules

2017-05-20 Thread Greg Landrum
Hi Ed, This is a weak spot; we haven't yet added decent reaction depiction. The best that's currently available is to use the old drawing code (Draw.ReactionToImage()) and to make sure that you have the cairo libraries installed so that you at least have decent drawings. Which operating

[Rdkit-discuss] Depicting reactions to the same quality as molecules

2017-05-19 Thread Ed Griffen
Is there a reaction depiction option similar to the MolDraw2DCairo which produces much better depictions that the simple Chem.Draw PIL images? Or am I just doing this wrong? Attempting to push a reaction through MolDraw2DCairo fails with: Traceback (most recent call last): File