Re: [Rdkit-discuss] GetFeatureForMol based on conformation Id

2019-07-08 Thread Omar H94
Dear Greg, Thank you for your response. The suggestion f.GetPos(confId=f.GetActiveConformer()) works and the retrieved feat position matches its actual position in the given conformer Id. Thanks for the help, Omar On Mon, Jul 8, 2019 at 9:13 AM Greg Landrum wrote: > Hi Omar, > > This is a bug.

Re: [Rdkit-discuss] GetFeatureForMol based on conformation Id

2019-07-07 Thread Greg Landrum
Hi Omar, This is a bug. Thanks for pointing it out. Until this is fixed, ff you want to get the position of the feature in its associated conformer, you can do the following: f.GetPos(confId=f.GetActiveConformer()) I hope this helps, -greg On Sun, Jul 7, 2019 at 1:44 PM Omar H94 wrote: > Dear

[Rdkit-discuss] GetFeatureForMol based on conformation Id

2019-07-07 Thread Omar H94
Dear RDKit users, I have a molecule with 100 generated conformers. I want to calculate the MolFeatures for each conformer. However, when using GetFeaturesForMol(mol, confId= ), the function generate features for first conformer only even when the confId is set to another number. This is the code: