Re: [Rdkit-discuss] Lynch-Willett algorithm

2014-01-02 Thread Mikolaj Kowalik
On Tue, 31 Dec 2013 20:19:37 -0500 Mikolaj Kowalik wrote: > n |CCNOCN |CCNCN | k > > 1 | 61 62 71 81 62 71 | 61 62 71 61 71 | 4 > 2 | 184 256 204 224 276 204 |

Re: [Rdkit-discuss] Lynch-Willett algorithm

2013-12-31 Thread Mikolaj Kowalik
On Tue, 31 Dec 2013 06:58:12 +0100 Greg Landrum wrote: > > LW algorithm is based on Morgan algorithm: > > > > 1) Initially, each atom is assigned an index i.e. an integer $V^{1}_{i}$ > > derived from its type and bond pattern (I know, it's rather vague but I'm > > practically quoting the sources.

Re: [Rdkit-discuss] Lynch-Willett algorithm

2013-12-30 Thread Greg Landrum
On Tue, Dec 31, 2013 at 1:32 AM, Mikolaj Kowalik wrote: > Dear All, > > Firstly, a little disclaimer. The question I have may seem to be rather > off-topic on that list, but thanks to RDKit's users community I have > learned > a lot of things regarding chemoinformatics in general, so I was hoping

[Rdkit-discuss] Lynch-Willett algorithm

2013-12-30 Thread Mikolaj Kowalik
Dear All, Firstly, a little disclaimer. The question I have may seem to be rather off-topic on that list, but thanks to RDKit's users community I have learned a lot of things regarding chemoinformatics in general, so I was hoping to find some help on topic not directly related to RDKit itself. I